Sequence 1: | NP_648337.1 | Gene: | CG3335 / 39119 | FlyBaseID: | FBgn0036018 | Length: | 918 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001247303.1 | Gene: | msi / 43087 | FlyBaseID: | FBgn0011666 | Length: | 634 | Species: | Drosophila melanogaster |
Alignment Length: | 262 | Identity: | 63/262 - (24%) |
---|---|---|---|
Similarity: | 105/262 - (40%) | Gaps: | 58/262 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 638 PKSEPKP-------KEEVKPEEKPIVNDAKPDEEDSRAEDADDEPEPNTT-----------LFLR 684
Fly 685 NLNFKTVQETVEKHFRHLGSIHTVEIAKRRDPENPREFKSLGYGFIQFKKSSVAEHALKNLQLTH 749
Fly 750 IDGNPVELKRSDRVLKTQDNDGAQRRLASQKKQTGTKILVRNIPFQAQYREVRDIFKAFGELRSL 814
Fly 815 RIPKKATTGEDAHRGFGFVDYMS------------------KAEAKRA--FDALSASTHLYGRRL 859
Fly 860 VL 861 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3335 | NP_648337.1 | RRM1_RBM19 | 2..77 | CDD:241008 | |
RRM_SF | 250..314 | CDD:302621 | |||
RRM3_RBM19 | 362..440 | CDD:241011 | |||
RRM4_RBM19 | 552..623 | CDD:241013 | |||
RRM | <638..845 | CDD:223796 | 59/244 (24%) | ||
RRM5_RBM19_like | 679..760 | CDD:240764 | 24/91 (26%) | ||
RRM6_RBM19 | 785..864 | CDD:241015 | 24/97 (25%) | ||
msi | NP_001247303.1 | RRM1_hnRNPA_hnRNPD_like | 205..276 | CDD:240771 | 23/76 (30%) |
RRM2_MSI | 292..365 | CDD:240769 | 18/74 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45463990 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |