DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG3335 and Rbp1

DIOPT Version :9

Sequence 1:	NP_648337.1	Gene:	CG3335 / 39119	FlyBaseID:	FBgn0036018	Length:	918	Species:	Drosophila melanogaster
Sequence 2:	NP_731510.1	Gene:	Rbp1 / 41294	FlyBaseID:	FBgn0260944	Length:	144	Species:	Drosophila melanogaster

Alignment Length:	141	Identity:	31/141 - (21%)
Similarity:	56/141 - (39%)	Gaps:	35/141 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   786 KILVRNIPFQAQYREVRDIFKAFGELRSLRIPKKATTGEDAHRGFGFVDYMSKAEAKRAFDALSA 850
            |:.|.|:...|...|:...|..:|.||::.:.:...       ||.||::..:.:|:.|..||.
  Fly    12 KVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPP-------GFAFVEFEDRRDAEDATRALD- 68

  Fly   851 STHLYGRRLVLEWSANDDNQDVEELRKRTAAKFDG-------------SQAATAAKRSRKSFFDV 902
            .|...|.|:.:|.|:.         |.|...:.:|             :.:|.....:..||:::
  Fly    69 GTRCCGTRIRVEMSSG---------RSRDRRRGEGGSSGRSGSGRYRITPSARTTSTATSSFYNI 124

  Fly   903 -----EGSVQP 908
                 :.|.||
  Fly   125 NNLQQQPSSQP 135

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG3335	NP_648337.1	RRM1_RBM19	2..77	CDD:241008
		RRM_SF	250..314	CDD:302621
		RRM3_RBM19	362..440	CDD:241011
		RRM4_RBM19	552..623	CDD:241013
		RRM	<638..845	CDD:223796	14/58 (24%)
		RRM5_RBM19_like	679..760	CDD:240764
		RRM6_RBM19	785..864	CDD:241015	21/77 (27%)
Rbp1	NP_731510.1	RRM_SRSF3_like	12..81	CDD:409808	20/76 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23147
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100