DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and NTN4

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:NP_067052.2 Gene:NTN4 / 59277 HGNCID:13658 Length:628 Species:Homo sapiens


Alignment Length:520 Identity:167/520 - (32%)
Similarity:233/520 - (44%) Gaps:109/520 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 STARLLLIGVLFASCSTAILGAQRPPINSAGGHELRGTTFMPALECYDPYGRPQKCLPEFINAAY 76
            |.|||||:.    .|:....|     ::...|...|         |      .:.|.|...|.|.
Human     3 SCARLLLLW----GCTVVAAG-----LSGVAGVSSR---------C------EKACNPRMGNLAL 43

  Fly    77 QLQIESTNTCGEQNDNHFCIQTMNQN----HKNCEFCK----YNDHNPSFLTDLHDPQSPTWWQS 133
            ..::.:..|||:.....:|..:.|.:    ...|:.|.    :..|.||.:.|.......|||||
Human    44 GRKLWADTTCGQNATELYCFYSENTDLTCRQPKCDKCNAAYPHLAHLPSAMADSSFRFPRTWWQS 108

  Fly   134 --ETMFEGIQHPNYVNLTLHLGKSYDITYVRILFRSPRPESFTIYKRTSESGPWIPYQFYSATCR 196
              :...|.||        |.|...:..|::.::|:||||.:..:.:.......|.||::::..|.
Human   109 AEDVHREKIQ--------LDLEAEFYFTHLIVMFKSPRPAAMVLDRSQDFGKTWKPYKYFATNCS 165

  Fly   197 DTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLEGRPSGINFERSGELQEWVTATD 261
            .|:.|.|. .::||     |:|||:||...|...||:.|..| ..|.......|.::||.:..|:
Human   166 ATFGLEDD-VVKKG-----AICTSKYSSPFPCTGGEVIFKAL-SPPYDTENPYSAKVQEQLKITN 223

  Fly   262 IRITL-------DRLNTFGDELFGDSQVLKSYF--YAISDIAVGARCKCNGHASKCVPSTG---- 313
            :|:.|       .:.|...:|        ..:|  |||.|..|...|.|||||.:|:|..|    
Human   224 LRVQLLKRQSCPCQRNDLNEE--------PQHFTHYAIYDFIVKGSCFCNGHADQCIPVHGFRPV 280

  Fly   314 --------MHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRS--TSTEVNECKACNCNGLADKC 368
                    :||:    |.|:|||.|..|..|.|||||..|:.:  .:...|||:.|.|||.||.|
Human   281 KAPGTFHMVHGK----CMCKHNTAGSHCQHCAPLYNDRPWEAADGKTGAPNECRTCKCNGHADTC 341

  Fly   369 FFDANLFNRTGH--GGHCLDCRENRDGPNCERCKENFYMRD-------DGYCVNCACDPVGSRSL 424
            .||.|::..:|:  ||.|.||:.|.:|..|:|||..|| ||       ...|..|:|.||||..|
Human   342 HFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFY-RDLRRPFSAPDACKPCSCHPVGSAVL 405

  Fly   425 QCN-------SHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTETGIC 482
            ..|       |:|.|.|||||.|.:||||...|:.||.:||:.|.|  .||      ||..||.|
Human   406 PANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC--AGS------CDPITGDC 462

  Fly   483  482
            Human   463  462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532 65/253 (26%)
EGF_Lam 298..347 CDD:238012 25/60 (42%)
Laminin_EGF 359..414 CDD:395007 27/63 (43%)
EGF_Lam 414..458 CDD:214543 24/50 (48%)
Laminin_EGF 461..511 CDD:395007 9/22 (41%)
LamB 572..697 CDD:214597
EGF_Lam 743..791 CDD:238012
EGF_Lam 793..836 CDD:214543
Laminin_EGF 847..897 CDD:395007
Laminin_EGF 902..953 CDD:395007
EGF_Lam 956..1001 CDD:214543
Laminin_EGF 1004..1046 CDD:395007
SMC_prok_B <1054..1621 CDD:274008
NTN4NP_067052.2 Laminin_N 34..260 CDD:459653 66/248 (27%)
EGF_Lam 261..320 CDD:238012 25/62 (40%)
Laminin_EGF 332..392 CDD:395007 26/60 (43%)
EGF_Lam 395..446 CDD:214543 24/50 (48%)
NTR_netrin-4_like 516..626 CDD:239633
Blue background indicates that the domain is not in the aligned region.

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