Sequence 1: | NP_001287009.1 | Gene: | LanB2 / 39118 | FlyBaseID: | FBgn0267348 | Length: | 1639 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009291422.1 | Gene: | ush2a / 568982 | ZFINID: | ZDB-GENE-060503-794 | Length: | 5243 | Species: | Danio rerio |
Alignment Length: | 1558 | Identity: | 377/1558 - (24%) |
---|---|---|---|
Similarity: | 547/1558 - (35%) | Gaps: | 542/1558 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 SCSTAILGAQRPPINSAGGHELRGTTFMPALECYDPYGRPQKCLPEFINAAYQLQIESTNTCGEQ 89
Fly 90 ND-NHFCIQTMNQNHKNCEFCKYNDHNPSFLTDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLG 153
Fly 154 KSYDITYVRILFRSPRPESFTIYKRTSESGPWIPYQFYSATCRDTYSLPDSRAIRKGEGEAHALC 218
Fly 219 TSEYSDISPLRDGEIAFSTLEGRPS---GIN-FERSGELQEWVTATDIRITLDRLNTFGDELFGD 279
Fly 280 SQV-LKSYFYAISDIAVGARCKCNGHASKCVPSTGMHGERTLVCEC--RHNTDGPDCDRCLPLYN 341
Fly 342 DLKWKRSTSTEVNECKACNCNGLADKCFFDANLFNRTGH-----GGHCLDCRENRDGPNCERCKE 401
Fly 402 NFYMRDDG-------YCVNCACDPVG--SRSLQCNS-HGKCQCKPGVTGDKCDRCDNNYYQFG-- 454
Fly 455 -PHGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPCFCYG 518
Fly 519 HTSECMTAPGYSIVSVTSNFNKFKERWTAADLNQREVDIKYNQYSRSIGTTAQGNEHVYFQAPDR 583
Fly 584 FLGDQRASYNRDLKFKLQLVGQVANTGVSDVILEGAGSRISLPIFAQGNGIPDQGVKEYTFRLHE 648
Fly 649 HHDYQWQPSQSARGFLSILSNLTAIKIRATYSVQGEAILDDVELQTAHRGAAGHPATWIEQCTCP 713
Fly 714 EGYLGQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADI----CDSETGRCICQHNTHGDNCDQC 774
Fly 775 AKGFY----GNALGGTPNDCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPT 835
Fly 836 GLLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLSGHFGDPLA-LPHGRC 899
Fly 900 DRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSG-NGCENCLCDPVGS 963
Fly 964 YNSTCDRYSGQCHC-RPGVMGQRCDQCENYFYGFS-SEG-CKPCECDESGSKGFQC-DQNGQCPC 1024
Fly 1025 NDNVEGRRCDRCKE-------NKYDRHRGCIDCPDCYNLVQDAADLHRAKLFNLSQTLDEIA-RT 1081
Fly 1082 PVTNDDEFEAKLKAVQEKVAVLAQDARDNSGDGGQTYAEVIDDLHKHLDSVREHLVSADKFQADA 1146
Fly 1147 NGEIDRARQNYTILDQ--ITENAKKELQQALDLLNDEGA---------QALARAKEKSVEFGQQS 1200
Fly 1201 -------------EQISDISREARALADKLESEA-----------QFDLKNAKDAKDA------- 1234
Fly 1235 ----VEKAHQLAKSAIDL---QLKI---------GTELRSEVGLELSHVKQ----SLGT---VVQ 1276
Fly 1277 TS-----KEALRKANEVYDTALTLLNDVNRQTQPE--IDISQLK-----KDAVAANERADELLK- 1328
Fly 1329 -----------------QITELSNSNGELFADFETEQ------ELTEALLKRAEQQQLED----- 1365
Fly 1366 --IELLERAKAAHDKAT----KAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKALQTVP 1422 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB2 | NP_001287009.1 | LamNT | 61..296 | CDD:214532 | 62/240 (26%) |
EGF_Lam | 298..347 | CDD:238012 | 19/50 (38%) | ||
Laminin_EGF | 359..414 | CDD:278482 | 24/66 (36%) | ||
EGF_Lam | 414..458 | CDD:214543 | 15/49 (31%) | ||
Laminin_EGF | 461..511 | CDD:278482 | 18/49 (37%) | ||
LamB | 572..697 | CDD:214597 | 5/124 (4%) | ||
TNFRSF | <721..848 | CDD:304602 | 25/134 (19%) | ||
CRD2 | 724..771 | CDD:276900 | 15/50 (30%) | ||
EGF_Lam | 743..791 | CDD:238012 | 18/55 (33%) | ||
Laminin_EGF | 847..897 | CDD:278482 | 17/50 (34%) | ||
Laminin_EGF | 902..953 | CDD:278482 | 23/51 (45%) | ||
Laminin_EGF | 956..1004 | CDD:278482 | 23/50 (46%) | ||
Laminin_EGF | 1004..1050 | CDD:278482 | 20/53 (38%) | ||
V_Alix_like | 1122..1443 | CDD:187408 | 87/413 (21%) | ||
Tar | 1139..1521 | CDD:223910 | 83/396 (21%) | ||
BAR | 1308..1469 | CDD:299863 | 30/155 (19%) | ||
vATP-synt_E | 1474..>1629 | CDD:304907 | |||
ush2a | XP_009291422.1 | Laminin_G_3 | 160..297 | CDD:290121 | |
Laminin_N | 307..528 | CDD:295486 | 70/277 (25%) | ||
EGF_Lam | 529..577 | CDD:238012 | 19/52 (37%) | ||
EGF_Lam | 586..638 | CDD:238012 | 21/52 (40%) | ||
Laminin_EGF | 653..703 | CDD:278482 | 15/49 (31%) | ||
Laminin_EGF | 706..756 | CDD:278482 | 18/49 (37%) | ||
EGF_Lam | 759..797 | CDD:214543 | 16/214 (7%) | ||
Laminin_EGF | 808..857 | CDD:278482 | 17/74 (23%) | ||
EGF_Lam | 859..912 | CDD:238012 | 20/87 (23%) | ||
EGF_Lam | 913..963 | CDD:238012 | 23/53 (43%) | ||
EGF_Lam | 965..1014 | CDD:238012 | 22/48 (46%) | ||
EGF_Lam | 1015..1064 | CDD:238012 | 19/51 (37%) | ||
FN3 | 1177..1253 | CDD:238020 | 15/75 (20%) | ||
FN3 | 1264..1375 | CDD:238020 | 27/122 (22%) | ||
FN3 | 1386..1469 | CDD:214495 | 19/93 (20%) | ||
LamG | 1537..1699 | CDD:238058 | |||
LamG | 1737..1890 | CDD:238058 | |||
FN3 | 1981..2071 | CDD:238020 | |||
FN3 | 2163..2253 | CDD:238020 | |||
FN3 | 2258..2341 | CDD:238020 | |||
FN3 | 2352..2443 | CDD:238020 | |||
FN3 | 2447..2544 | CDD:238020 | |||
FN3 | 2547..2633 | CDD:238020 | |||
FN3 | 2635..2733 | CDD:238020 | |||
FN3 | 2743..2807 | CDD:238020 | |||
FN3 | 2830..2932 | CDD:238020 | |||
fn3 | 2939..3014 | CDD:278470 | |||
FN3 | 3032..>3099 | CDD:238020 | |||
FN3 | 3542..3611 | CDD:238020 | |||
FN3 | 3615..3701 | CDD:238020 | |||
fn3 | 3718..3784 | CDD:278470 | |||
FN3 | 3801..3887 | CDD:238020 | |||
FN3 | 3908..3971 | CDD:238020 | |||
FN3 | 3996..4086 | CDD:238020 | |||
FN3 | 4186..4284 | CDD:238020 | |||
fn3 | 4288..4366 | CDD:278470 | |||
FN3 | 4382..4465 | CDD:238020 | |||
FN3 | 4470..4553 | CDD:238020 | |||
FN3 | 4555..4653 | CDD:238020 | |||
FN3 | 4679..4753 | CDD:238020 | |||
fn3 | 4760..4830 | CDD:278470 | |||
FN3 | 4864..4955 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |