Sequence 1: | NP_001287009.1 | Gene: | LanB2 / 39118 | FlyBaseID: | FBgn0267348 | Length: | 1639 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001034154.1 | Gene: | lama4 / 566796 | ZFINID: | ZDB-GENE-040724-213 | Length: | 1871 | Species: | Danio rerio |
Alignment Length: | 994 | Identity: | 245/994 - (24%) |
---|---|---|---|
Similarity: | 395/994 - (39%) | Gaps: | 235/994 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 724 CAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCI-CQHNTHGDNCDQCAKGFYGNALGGTP 787
Fly 788 NDCKRCPCPNDGACLQINEDTVICTE--------CPKGYFGSRCEQCSDGFFGDPTGLLGEVQTC 844
Fly 845 KSCDCNGNVDPNAVGN-CNRTTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAG 908
Fly 909 TEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSG 973
Fly 974 QCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGSKGFQCD-QNGQC--------PCNDNVE 1029
Fly 1030 GRRCDRCKENKYDRHRGCIDCPDCYNLVQDAADLHRAKLFNLSQTLDEIARTPVTNDDEFEAKLK 1094
Fly 1095 AVQEKVAVLAQDARDNSGDGGQTYAEVIDDLHKHLDSVREHLVSADKFQADANGEIDRARQNYT- 1158
Fly 1159 ------ILDQITENAKKELQQALDLLND----------EGAQALARAKEKSVEFGQQSEQISDIS 1207
Fly 1208 REARALADKLESEAQFDLKNAKDAKDAVEKAHQLAKSAIDLQLKIGTELRSEVGLELSHVKQSLG 1272
Fly 1273 TVVQTSKEALRKANEVYDTALTLLNDVNRQTQPEIDISQLKKDAVAANERADELLKQITELSNSN 1337
Fly 1338 GELFADFETEQELTEALLKR--AEQQQLEDIELLERAKAAHDKATKAVEQGDNTLKEANNTYEKL 1400
Fly 1401 AGFQSDVQRSSESAEKALQTVP-NIEKEIQNAESLISQAEEALDGANKNANEAKKNAQEAQLKYA 1464
Fly 1465 EQASKDA-----ELIRR--KANETKVAARNLREE----ADQLNHRVKLTEMDIFK-LEESST--- 1514
Fly 1515 ---KDDNLVDDAKRKVGQAKADTQEAQKQIEKANADLTAIKDE-----LENLKDINTGDLDRLEN 1571
Fly 1572 RLATVEGEINRV-----NLTGRI--------------EKYREQRTIQKNLIDKYDAELR--ELKD 1615
Fly 1616 EVQNI--------GLISKA 1626 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB2 | NP_001287009.1 | LamNT | 61..296 | CDD:214532 | |
EGF_Lam | 298..347 | CDD:238012 | |||
Laminin_EGF | 359..414 | CDD:278482 | |||
EGF_Lam | 414..458 | CDD:214543 | |||
Laminin_EGF | 461..511 | CDD:278482 | |||
LamB | 572..697 | CDD:214597 | |||
TNFRSF | <721..848 | CDD:304602 | 46/132 (35%) | ||
CRD2 | 724..771 | CDD:276900 | 22/47 (47%) | ||
EGF_Lam | 743..791 | CDD:238012 | 20/48 (42%) | ||
Laminin_EGF | 847..897 | CDD:278482 | 25/50 (50%) | ||
Laminin_EGF | 902..953 | CDD:278482 | 16/50 (32%) | ||
Laminin_EGF | 956..1004 | CDD:278482 | 16/47 (34%) | ||
Laminin_EGF | 1004..1050 | CDD:278482 | 12/54 (22%) | ||
V_Alix_like | 1122..1443 | CDD:187408 | 67/340 (20%) | ||
Tar | 1139..1521 | CDD:223910 | 84/419 (20%) | ||
BAR | 1308..1469 | CDD:299863 | 34/163 (21%) | ||
vATP-synt_E | 1474..>1629 | CDD:304907 | 43/200 (22%) | ||
lama4 | NP_001034154.1 | EGF_Lam | 48..>84 | CDD:238012 | 18/35 (51%) |
Laminin_EGF | 99..152 | CDD:278482 | 17/58 (29%) | ||
EGF_Lam | 155..207 | CDD:238012 | 25/53 (47%) | ||
EGF_Lam | 209..247 | CDD:214543 | 16/44 (36%) | ||
EGF_Lam | 256..300 | CDD:214543 | 14/44 (32%) | ||
Laminin_I | 351..611 | CDD:283627 | 64/344 (19%) | ||
SPEC | 474..665 | CDD:295325 | 48/234 (21%) | ||
Laminin_II | 790..919 | CDD:283628 | 22/98 (22%) | ||
LamG | 893..1067 | CDD:238058 | |||
LamG | 1104..1259 | CDD:238058 | |||
LamG | 1289..1422 | CDD:238058 | |||
LamG | 1535..1672 | CDD:238058 | |||
LamG | 1696..1847 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |