DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and ntng2a

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:NP_001429168.1 Gene:ntng2a / 560014 ZFINID:ZDB-GENE-081105-186 Length:1256 Species:Danio rerio


Alignment Length:1322 Identity:239/1322 - (18%)
Similarity:390/1322 - (29%) Gaps:445/1322 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PALECYDPYGRPQKCLPEFINAAYQLQIESTN-TCGEQNDNHFCIQTMNQNHKNCE-FCKYNDHN 115
            |..|.|....:|.. :.|::    |:::|..: |||...:.:..::........|: ..|...|.
Zfish    40 PTWEYYACQPKPMS-MKEYM----QIRVEPPDITCGNPPERYCTLENPYLCSDECDASTKELAHP 99

  Fly   116 PSFLTDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDIT-YVRILFRSPRPESFTIYKRT 179
            |..:.|.......|:||:.| :.....|...|::|...||.::| .::|.|...||....:.|..
Zfish   100 PELMQDSERTGLITYWQTVT-WSRYPEPLLANISLSWNKSLELTDDIQISFEYGRPTIMVLDKSL 163

  Fly   180 SESGPWIPYQFYSATCRDTYSLPDSRA-IRKGEGEAHALCTSEYSD-ISPLRDGEIAFSTLE--- 239
            :....|.|||:|:..|.:.:.:...|. ..........:||.:||. :....:..:.|...|   
Zfish   164 NYGRTWQPYQYYADDCMEAFGMLAKRVQDLSATNVTRVICTEQYSRWVGSKNEKNVRFEVRERFA 228

  Fly   240 ----GRPSGIN-----FERSGELQEWVTATDIRITLDRLNTFGDELFGDSQVLKSYFYAISDIAV 295
                .:...::     .|....|:::.|.|::|:.|.|....|..:..|:  |..||||||:|.:
Zfish   229 IFAGAKLQNMDNLYTRMESMKGLRDFFTFTNLRLRLLRPALGGTYVQKDN--LLKYFYAISNIDI 291

  Fly   296 GARCKCNGHASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRST-----STEVNE 355
            .||||||.||.:|....|     ||.|:|.|||.|.||..|...:....||..:     :...|.
Zfish   292 PARCKCNLHAGQCSLRDG-----TLQCDCEHNTTGQDCLVCERGFKAKSWKPGSYLPTPNGSPNI 351

  Fly   356 CKACNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDGYCVNCACDPVG 420
            |:|...:|:.                                             .:....||..
Zfish   352 CEASGTSGMP---------------------------------------------TLAVTLDPAT 371

  Fly   421 SR------------SLQCNSHGKCQCKP-------------GVTGDKCDRCDNNYYQFGPHGCQQ 460
            :.            .|..:|..|...:|             ....|.....|.:           
Zfish   372 APVLITTSISPFIVQLTSDSTTKGSVQPISVPQTPDPSASLDTITDTATSSDTS----------- 425

  Fly   461 CGCDSGGSH-----QNTPAC------DTET----------------------------------- 479
               .:|||.     .||||.      ||.|                                   
Zfish   426 ---TAGGSAIPESLTNTPAATISSQTDTSTLTTMPSPSNPALTVIPTTPDQPVSAAPDVIPDAAT 487

  Fly   480 --------GICFCKENVEG---------RRCNECKPGFFNLDKNNRFGCTPCFCYG-------HT 520
                    ...|...|...         ...::......|:........||.....       :|
Zfish   488 TATDTVFATTAFGASNPRSALPEVTDALASSSDATATTLNMVIRATMATTPSVTMATSETTSDNT 552

  Fly   521 SECMTAPGYSIVSVTSNFNKFKERWTAADLNQR-----------------EVDIKYNQYSRSIGT 568
            .:..|:|....||..      .|..||...|..                 ::|:..:..|..:.:
Zfish   553 IQLPTSPSNDAVSPP------VETSTAGSENMAAVPSTDATMKTVDELPPDIDVVVSATSVPLPS 611

  Fly   569 TAQGNEHV------YFQAPDRFLGDQRASYNRD----LKFKLQLVGQVANTGVSD---VILEGAG 620
            .:..:..|      ...||....|....:.:.|    ....|:.......|.|||   ...||.|
Zfish   612 PSDRDAPVIDADPTITDAPAPEAGSIAPARDADAPATAAVALETDEDAEVTNVSDETKAAPEGPG 676

  Fly   621 ----------SRISLPIFAQGNGI------------------PDQGVKEYTFRLHEHHDYQWQ-P 656
                      ..:|..:.:..:|:                  |....||......:....:.| |
Zfish   677 DGAEVVMRSEETVSTDVDSPTSGVTLLTGEPVPDATPPPESKPPPETKEEKTEAKDKDTPEIQAP 741

  Fly   657 SQSARGFLSILSNLTAIK--------------IRATYSVQGEAILDDVELQTAHRGAAGHPATWI 707
            |:.......:|..:...|              |:.:..|:.:..:..||::..      ..||.:
Zfish   742 SEVEEKIEELLVEIKEDKTETDLVNEDEDAPDIKPSSEVEEKRDVPLVEIKEK------ETATNL 800

  Fly   708 EQCTCPEGYLGQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCD 772
            |.            |.........|:.....|..:|.:....             :..|:.:|.|
Zfish   801 EN------------EDKDASDIKLPSEVEEKMEDLPVEIQEE-------------KQKTNVENED 840

  Fly   773 QCAKGFYGNA---------LGGTPNDCKRCPCPNDGACLQI---------NEDTVICT------- 812
            :.......::         ||.|..| |.....:|...|.:         |||.::.|       
Zfish   841 KDTPDIKPSSEVEEKSEVPLGETTED-KPSTKLDDKDTLDVKTSPEIEEKNEDPLVETKEEKTTK 904

  Fly   813 -----------------------ECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTC---------- 844
                                   |.|:.....:.....|.......|...|:...          
Zfish   905 KDEDASDSKPPFKVRENSEEPKMEKPETNLEKKDNNTPDIKLSSEVGEKSELPIAETKEKKEIKN 969

  Fly   845 ---KSCDCNGNVDPNAVGNCNRTTGECLKCIHN-TAGEHCDQCLSGHFGDPLALPHGRCDRC--- 902
               |..|.......:.||..:..:.|....::: ...:..:..:||.      :.:.:.|:.   
Zfish   970 LEKKDKDAPDRKPLSKVGENSEESKESKTALNSEKKDKDAEASVSGD------IKNDKLDKTREA 1028

  Fly   903 ----SCYEAGTEQDEQ---------------------------SITR----------CDQVTGQC 926
                ...||..|:.|:                           .::|          |:..:.:|
Zfish  1029 EKTEKSKEAKEEKKEKEKHKEKEFKEYEKKVVARILIPGGPKTQLSRIAYIKFQDCECNGHSNRC 1093

  Fly   927 ------------QCKPNVIGRDCGECQPGYFNIRSG-----NGCENCLCDPVGSYNSTCDRYSGQ 974
                        .||.|..|::|..|:.|||...|.     |.|..|.|:.:||.::.|:. :|.
Zfish  1094 SYIDFINIVTCVSCKHNTRGQNCQHCRLGYFRNASAELDDENVCIECNCNQLGSIHARCND-TGF 1157

  Fly   975 CHCRPGVMGQRCDQCENYFYGFS-SEGCKPCECDES---GSKGFQCDQNGQCPCNDNVEGRRCD- 1034
            |.||.|..||:|:.|   ..|:: .:||.|..||:.   ...|..|.||.:|.|..|..|..|: 
Zfish  1158 CQCRDGTAGQKCEDC---LPGYTWKQGCVPNVCDDEFLLCQNGGSCIQNQKCVCPPNFRGVLCEQ 1219

  Fly  1035 -RCKENKYDRHRGCID-CPDCY 1054
             ||:..|     |||| ...||
Zfish  1220 PRCQGEK-----GCIDGASACY 1236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532 57/251 (23%)
EGF_Lam 298..347 CDD:238012 21/48 (44%)
Laminin_EGF 359..414 CDD:395007 1/54 (2%)
EGF_Lam 414..458 CDD:214543 8/68 (12%)
Laminin_EGF 461..511 CDD:395007 13/112 (12%)
LamB 572..697 CDD:214597 27/180 (15%)
EGF_Lam 743..791 CDD:238012 8/56 (14%)
EGF_Lam 793..836 CDD:214543 9/81 (11%)
Laminin_EGF 847..897 CDD:395007 6/50 (12%)
Laminin_EGF 902..953 CDD:395007 18/111 (16%)
EGF_Lam 956..1001 CDD:214543 15/45 (33%)
Laminin_EGF 1004..1046 CDD:395007 14/46 (30%)
SMC_prok_B <1054..1621 CDD:274008 1/1 (100%)
ntng2aNP_001429168.1 None

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