DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and NTN3

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:NP_006172.1 Gene:NTN3 / 4917 HGNCID:8030 Length:580 Species:Homo sapiens


Alignment Length:651 Identity:206/651 - (31%)
Similarity:287/651 - (44%) Gaps:141/651 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLLIGVLFASCSTAILGAQRPPINSAGGHELRGTTFMPALECYDPYGRPQKCLPEFINAAYQLQI 80
            ||..|.|||:.|..      ||              .||..|:|..|.|:.|:|..:|||...::
Human     9 LLTAGTLFAALSPG------PP--------------APADPCHDEGGAPRGCVPGLVNAALGREV 53

  Fly    81 ESTNTCGEQNDNHFCIQTMNQNHKNCEFCKYND----HNPSFLTDLHDPQSPTWWQSETMFEGIQ 141
            .:::|||               ......|..:|    |:|:.||......||..|:||::   .:
Human    54 LASSTCG---------------RPATRACDASDPRRAHSPALLTSPGGTASPLCWRSESL---PR 100

  Fly   142 HPNYVNLTLHLGKSYDITYVRILFRSPRPESFTIYKRTSESGPWIPYQFYSATCRDTYS-LPDSR 205
            .|..|.||:.|||::::.:|.:.|.|..|.|..:.|.......|.|..|:|:.|...|. ||...
Human   101 APLNVTLTVPLGKAFELVFVSLRFCSAPPASVALLKSQDHGRSWAPLGFFSSHCDLDYGRLPAPA 165

  Fly   206 AIRKGEGEAHALCTSEYSDISPLR----DGEIAFSTLEGRPSGINFERSGELQEWVTATDIRITL 266
            ....|.| ..|||..     :||.    .|.:|||..:..|.|::.:.|..||:||||||:|:.|
Human   166 NGPAGPG-PEALCFP-----APLAQPDGSGLLAFSMQDSSPPGLDLDSSPVLQDWVTATDVRVVL 224

  Fly   267 DRLNTFGDELFGDSQVLKSYFYAISDIAVGARCKCNGHASKCVPSTGMHGERTLVCECRHNTDGP 331
            .|.:|.||.  .|.:.:..|.||.:|:.||.|||||||||:|:..|..|    |:|:|||.|:||
Human   225 TRPSTAGDP--RDMEAVVPYSYAATDLQVGGRCKCNGHASRCLLDTQGH----LICDCRHGTEGP 283

  Fly   332 DCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANLFNRTGH--GGHCLDCRENRDGP 394
            ||.||.|.|.|..|:|:|:.|.:.|.||:|||.|.:|.|:..|:..:|.  ||.||:||.|..|.
Human   284 DCGRCKPFYCDRPWQRATARESHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGR 348

  Fly   395 NCERCKENFYMRDDG-------YCVNCACDPVGSRSLQCN-SHGKCQCKPGVTGDKCDRCDNNYY 451
            :|..|:|.|| ||.|       .|..|.|.|||:....|| :.|:|.||.||||..|:||...:.
Human   349 HCHYCREGFY-RDPGRALSDRRACRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPGFQ 412

  Fly   452 QFGPHGCQQCGCDSGGSHQNTPACDTETGICFCKEN---VEGRRC-NECKP--GFFNLDKNNRFG 510
            |               |......| .:|.|....|:   |:.:.| :.|||  |.:.:....   
Human   413 Q---------------SRSPVAPC-VKTPIPGPTEDSSPVQPQDCDSHCKPARGSYRISLKK--- 458

  Fly   511 CTPCFC---------YGHTSECMTAPGYSIVSVTSNFNKFKERWTAADLNQREVDIKYNQYSRSI 566
                ||         .|...|...|.....|:|.:.|...:||                      
Human   459 ----FCKKDYAVQVAVGARGEARGAWTRFPVAVLAVFRSGEER---------------------- 497

  Fly   567 GTTAQGNEHVYFQAPDRFLGDQRASYNRDLKFKLQLVGQVANTGVSDVILEGAGSRISLPIFAQG 631
              ..:|:..::..|.|...|..|....|  ::.|...|..|..|       |||.|....|.|:|
Human   498 --ARRGSSALWVPAGDAACGCPRLLPGR--RYLLLGGGPGAAAG-------GAGGRGPGLIAARG 551

  Fly   632 N 632
            :
Human   552 S 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532 75/243 (31%)
EGF_Lam 298..347 CDD:238012 28/48 (58%)
Laminin_EGF 359..414 CDD:395007 26/63 (41%)
EGF_Lam 414..458 CDD:214543 19/44 (43%)
Laminin_EGF 461..511 CDD:395007 11/55 (20%)
LamB 572..697 CDD:214597 17/61 (28%)
EGF_Lam 743..791 CDD:238012
EGF_Lam 793..836 CDD:214543
Laminin_EGF 847..897 CDD:395007
Laminin_EGF 902..953 CDD:395007
EGF_Lam 956..1001 CDD:214543
Laminin_EGF 1004..1046 CDD:395007
SMC_prok_B <1054..1621 CDD:274008
NTN3NP_006172.1 LamNT 34..253 CDD:214532 76/244 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..83 5/20 (25%)
EGF_Lam 254..299 CDD:238012 28/48 (58%)
Laminin_EGF 311..362 CDD:395007 24/51 (47%)
EGF_Lam 373..422 CDD:238012 21/64 (33%)
NTR_like 456..562 CDD:470599 27/137 (20%)
Cell attachment site, atypical. /evidence=ECO:0000255 500..502 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.

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