DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and wb

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:NP_723870.1 Gene:wb / 43946 FlyBaseID:FBgn0261563 Length:3375 Species:Drosophila melanogaster


Alignment Length:1180 Identity:372/1180 - (31%)
Similarity:527/1180 - (44%) Gaps:232/1180 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LFASCSTAILGAQRPPI-----------NSAGGHELRGTTFMPALECYDPYGRPQK--CLPEFIN 73
            :.|..|:..:..::||.           ..|||..||      .|:..|.|.....  ..|...|
  Fly   101 MLAIASSESVTKKKPPQRRRNGKLQKSGGGAGGGALR------LLKTEDVYSSSFSGGLYPPLFN 159

  Fly    74 AAYQLQIESTNTCGEQNDNHFCIQTMNQNHKNCEFCKYNDHN---------PSFLTDLHDPQSPT 129
            ...:.||....|||:.....:|.|.   ..|.|..|  |.|:         .|.::......|.:
  Fly   160 VVPRAQISVNATCGQNGAEEYCKQV---GAKPCGIC--NAHSSDRAKQRSIQSLISSGSGSGSGS 219

  Fly   130 -----WWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRI-LFRSPRPESFTIYKRTSESG----P 184
                 ||||.|:..|.|. .||.:.|.|.:::.|..|.: ...||||.|:.:.|  |..|    |
  Fly   220 GFEEGWWQSPTLQGGRQF-EYVTILLDLKQTFQIFSVWLKSANSPRPASWILEK--SLDGINFEP 281

  Fly   185 WIPYQFYSATCRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLEGRPSGINFER 249
            |..:....|.|:..::|.........:.:...:|::::|...||.:|.:..|.|:.||...  ::
  Fly   282 WQYFGLSDADCQRRWNLSGQNGKYVFQNDTEIICSTQFSKPGPLENGVLHASLLKNRPGAT--DQ 344

  Fly   250 SGELQEWVTATDIRITLDRLNTFG------DELFGDSQVLKSYFYAISDIAVGARCKCNGHASKC 308
            |.||.:::|...|||.|..:::..      |.|.....:.|..||::|.:.|.||..|||||::.
  Fly   345 SPELMKFITTRYIRIRLQGMHSTANQDNSLDWLLDSPSLEKHSFYSLSQLKVSARLDCNGHANRS 409

  Fly   309 VPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDAN 373
            ..|.   .:..:.|.|:|||.|..|::|.||:.|..::..     .||:.|.|.|.|:.|.:|..
  Fly   410 HESP---DDPLMQCICQHNTCGAQCEQCCPLFQDRPYQMG-----GECEICQCYGHAESCTYDPF 466

  Fly   374 LFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDG----YCVNCACDPVGSRSLQCNSH-GKCQ 433
            |     ..|.|..|..|..|..||.|:..||...|.    .|:.|:|:|..|.. .|.|. |.|.
  Fly   467 L-----DKGICQSCSNNTAGIECEFCEMGFYRELDAPLTDPCLPCSCNPARSTG-GCQSDGGSCN 525

  Fly   434 CKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKP 498
            |..|..|..|:.|...||   ...|::|.||..||..:|.:|   :|:|.||.||||..|:||.|
  Fly   526 CLEGFQGKNCEECAPGYY---GDDCKRCECDERGSLGSTGSC---SGVCQCKLNVEGSTCSECAP 584

  Fly   499 GFFNLDKNNRFGCTPCFCYGHTSECMTAPGYSIVSVTSNFNKFKERWTAADLNQREVDIKYNQYS 563
            |:|:|...|..|||.|:|.|.:..|.:|...::...|.|      .|...|: ||...|      
  Fly   585 GYFDLSAENAEGCTSCWCSGVSQTCHSAKLQTLAFETLN------DWKITDI-QRVKPI------ 636

  Fly   564 RSIGTTAQGN-----------EHVYFQAPDRFLGDQRASYNRDLKFKLQ---------------- 601
             ||...|:.|           |.:|:||...:||::..||...|:..|.                
  Fly   637 -SIPVDAETNRLIFANELDEVEAIYWQASLGYLGNRLTSYGSRLQLVLSWDVIRGDRSGKPTTGP 700

  Fly   602 ---LVGQVA-NTGVSDVILEGAGSRISLPIFAQG-NGIPDQGVKEYT-FRLHEHHDYQWQPSQSA 660
               |||:.. .....|..|:|.|..:::.:...| ..:|...|...| .|..|..||..: |.:.
  Fly   701 NVILVGKNGLKIAFGDESLDGLGINLNVTLTEVGWYHVPPTVVDIKTRLRRTEGGDYHGE-SVTR 764

  Fly   661 RGFLSILSNLTAIKIRATYSV-QGEAILDDVELQTAHRGAAGHPATWIEQCTCPEGYLGQFCESC 724
            ..|||:|.:|.|:.|||.:.. |||..|:...:.:......|..::.:|||.||.||.|..||.|
  Fly   765 SQFLSVLVSLDAVLIRAAFHTDQGETSLERAVIYSGGVELGGKSSSQVEQCLCPAGYTGLSCEGC 829

  Fly   725 APGYR---HSPARGGPFMPCIPCDCHGHADICDSETGRC-ICQHNTHGDNCDQCAKGFYGNALGG 785
            |.|::   .:.:.......||||.|:||::.||.::|.| .|.|||.||.|::|..|:|||.|.|
  Fly   830 AFGFKRIYENTSDHQILSKCIPCPCNGHSNSCDLQSGNCGDCMHNTFGDRCERCQLGYYGNPLQG 894

  Fly   786 TPNDCKRCPCPNDGACLQINEDT----------------------------VICTECPKGYFGSR 822
            ||||||||.||       ::||:                            .|||:||:||.|..
  Fly   895 TPNDCKRCACP-------LSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDH 952

  Fly   823 CEQCSDGFFGDP--TGLLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLS 885
            |:.|.||:||:|  .|     .:|:.|||.|       |.||.|||||:.|..||.|.||::|..
  Fly   953 CQVCDDGYFGNPRQPG-----SSCQRCDCAG-------GPCNVTTGECITCRGNTEGWHCERCKL 1005

  Fly   886 GHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSG 950
            |::|||..    .||.|.|:..|:|..     .||...|||.|||...|:.|.||..||.|:.. 
  Fly  1006 GYWGDPAV----GCDPCHCHTEGSESG-----LCDSTDGQCLCKPRYAGQKCDECDVGYANVEL- 1060

  Fly   951 NGCENCLCDPVGS-YNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGF------------------ 996
             .|.:|.|||:|| ....||.::|||||:.||||.:|.:|::.::|.                  
  Fly  1061 -RCPSCNCDPLGSLVQDRCDPHTGQCHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSD 1124

  Fly   997 ------------------SSEGCKPCECDESGSKGFQCD-QNGQCPCNDNVEGRRCDRCKENKYD 1042
                              |:..|:.|.|...||....|| :.|||.|..||.|||||:|:...::
  Fly  1125 SDDDEWELVPDTEDPNSESTVACEECHCSSVGSLSSDCDKRTGQCACLANVTGRRCDKCRPGHWN 1189

  Fly  1043 --RHRGCIDC 1050
              ...||.||
  Fly  1190 LTAGEGCRDC 1199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532 66/261 (25%)
EGF_Lam 298..347 CDD:238012 18/48 (38%)
Laminin_EGF 359..414 CDD:395007 19/58 (33%)
EGF_Lam 414..458 CDD:214543 15/44 (34%)
Laminin_EGF 461..511 CDD:395007 23/49 (47%)
LamB 572..697 CDD:214597 40/158 (25%)
EGF_Lam 743..791 CDD:238012 27/48 (56%)
EGF_Lam 793..836 CDD:214543 20/72 (28%)
Laminin_EGF 847..897 CDD:395007 23/49 (47%)
Laminin_EGF 902..953 CDD:395007 19/50 (38%)
EGF_Lam 956..1001 CDD:214543 21/81 (26%)
Laminin_EGF 1004..1046 CDD:395007 18/44 (41%)
SMC_prok_B <1054..1621 CDD:274008
wbNP_723870.1 Laminin_N 153..398 CDD:459653 66/254 (26%)
EGF_Lam 401..450 CDD:238012 18/56 (32%)
EGF_Lam 505..552 CDD:238012 17/50 (34%)
Laminin_EGF 550..597 CDD:395007 23/49 (47%)
Laminin_B 660..813 CDD:459652 39/153 (25%)
EGF_Lam 851..900 CDD:238012 27/48 (56%)
Laminin_EGF <943..971 CDD:395007 13/32 (41%)
Laminin_EGF 974..1018 CDD:395007 25/54 (46%)
EGF_Lam 1017..1065 CDD:238012 20/54 (37%)
Laminin_EGF 1065..>1105 CDD:395007 19/39 (49%)
EGF_Lam 1150..1197 CDD:238012 19/46 (41%)
Laminin_EGF 1199..1247 CDD:395007 1/1 (100%)
EGF_Lam 1247..1292 CDD:238012
Laminin_EGF 1294..1342 CDD:395007
Laminin_EGF 1340..1392 CDD:395007
Laminin_B 1486..1626 CDD:459652
EGF_Lam 1669..1716 CDD:238012
Laminin_EGF 1718..1767 CDD:395007
EGF_Lam 1772..1819 CDD:238012
YhaN <1907..2141 CDD:443752
SMC_prok_B <2123..>2390 CDD:274008
Laminin_II 2279..2400 CDD:368703
LamG 2399..>2492 CDD:473984
LamG 2586..2753 CDD:238058
Laminin_G_2 2804..2944 CDD:460494
LamG 3018..3167 CDD:238058
LamG 3192..3347 CDD:238058
Blue background indicates that the domain is not in the aligned region.

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