Sequence 1: | NP_001287009.1 | Gene: | LanB2 / 39118 | FlyBaseID: | FBgn0267348 | Length: | 1639 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011524280.1 | Gene: | LAMA3 / 3909 | HGNCID: | 6483 | Length: | 3342 | Species: | Homo sapiens |
Alignment Length: | 2527 | Identity: | 509/2527 - (20%) |
---|---|---|---|
Similarity: | 790/2527 - (31%) | Gaps: | 1081/2527 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 LLLIGVLFASCSTAILGAQRPPINSAGGHELRGTTFMPALECYDPYGRPQKCLPEFINAAYQLQI 80
Fly 81 ESTNTCGEQNDNH-------FC--------------IQTMNQNHKNCEFCKYNDHNPSF-LTDLH 123
Fly 124 DPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRILF-RSPRPESFTIYKRTSESGPWIP 187
Fly 188 YQFYS---ATCRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLEGRPSGINFER 249
Fly 250 SGELQEWVTATDIRITLDRLNTFGDELFGDSQ----VLKSYFYAISDIAVGARCKCNGHASKCVP 310
Fly 311 STGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANL- 374
Fly 375 -----FNRTG---HGGHCLDCRENRDGPNCERCKENFYM-------RDDGYCVNCACDP------ 418
Fly 419 ----------------------------------------------------------------- 418
Fly 419 ---------------------------------------VGSRSLQCNS-HGKCQCKPGVTGDKC 443
Fly 444 DRCDNNYYQF-----------------------------------------------GPHGCQQC 461
Fly 462 GCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPC----------FC 516
Fly 517 YGHTSEC---------------------------------------------------------- 523
Fly 524 --MTA---------------------------PGYSIVS-------------------------- 533
Fly 534 ----VTSNFNKFKER-------WTA---------------------------------------- 547
Fly 548 ----------------------------------------------------ADLNQREVDIKYN 560
Fly 561 -------------QYS-------------RSIGTTAQGNEHVY---------------------- 577
Fly 578 -------FQAPD---RFLGDQ--------------------RASYNRDLKFKLQLVGQVANTGVS 612
Fly 613 DVILEGAGSRISLPIFAQGNG-----------------------IPDQGVKEYTFRLHEHH---- 650
Fly 651 --------DYQWQPSQS-----------------ARGFLSILSNLTAIKIRATYSV-QGEAIL-- 687
Fly 688 -------DDVELQTAHRGAAGHPATWIEQCTCPEGYL-----GQFCESCA---PGYRHSPARGGP 737
Fly 738 FMPCIPCDCH---GHADICDSETGRCICQHNTHGDNCDQCAKGFYGNALGGTPNDCKRCPCPNDG 799
Fly 800 ACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCN--GNVDPNAVGNCN 862
Fly 863 RTTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQ 927
Fly 928 CKPNVIGRDCGECQPGYFNIRSGN--GCENCLC------------------DPVGSYNSTCDR-- 970
Fly 971 -----------------------------------------YSGQ-------------------- 974
Fly 975 ----------------------------------------------------------------- 974
Fly 975 ---------------------------------CHCRPGVMGQRCDQCENYFY----GFSSEGCK 1002
Fly 1003 PCECDESGSKGFQC-DQNGQC-PCNDNVEGRRCDRCKENKYDR--HRGCIDCP------------ 1051
Fly 1052 --------------------------------------------------------DCYNLVQDA 1060
Fly 1061 ADLHRAK-----------LFNLSQTLDEIARTPVTNDDEFEAKLKAVQEKVAVL---------AQ 1105
Fly 1106 DARD----------NSGDGGQTYAEVIDDLHKHLDSVREHL-VSADKFQADANGEIDRARQNYTI 1159
Fly 1160 LDQITENAKKELQQALDLLNDEGAQALARAKEKSVEFGQQSEQISDISREARALAD----KLESE 1220
Fly 1221 AQFDLKNAKDAKDAV---EKAHQ-----LAKSAID----LQLKIGTELRSEVGLELSHVKQSLGT 1273
Fly 1274 VVQTSKEAL----RKANEV------YDTALTLLNDVNRQTQPEIDI-----SQLKKDAVAANERA 1323
Fly 1324 DELLKQITELSNSNGELFADFETE------QELTEALLKRAEQQQLEDIELL----ERAKAAHDK 1378
Fly 1379 ATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKALQTVPNIEKEI-QNAESLISQAEEAL 1442
Fly 1443 DGANKNANEAKKNAQEAQLKYAEQASKDAELIRRKAN----ETKVAARNLREEADQLNHRVKLTE 1503
Fly 1504 MDIFKLEESSTKDDNLVDDAKRKVGQAKADTQEAQKQIEKANADLTAIKD-----ELENLKDINT 1563
Fly 1564 GDLDRLENRLATVEGEINRV-NLTGRIEKYREQRTIQKNLIDKYDAELRELKDEVQN 1619 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB2 | NP_001287009.1 | LamNT | 61..296 | CDD:214532 | 77/264 (29%) |
EGF_Lam | 298..347 | CDD:238012 | 21/48 (44%) | ||
Laminin_EGF | 359..414 | CDD:278482 | 23/70 (33%) | ||
EGF_Lam | 414..458 | CDD:214543 | 23/201 (11%) | ||
Laminin_EGF | 461..511 | CDD:278482 | 19/49 (39%) | ||
LamB | 572..697 | CDD:214597 | 34/238 (14%) | ||
TNFRSF | <721..848 | CDD:304602 | 35/132 (27%) | ||
CRD2 | 724..771 | CDD:276900 | 15/52 (29%) | ||
EGF_Lam | 743..791 | CDD:238012 | 19/50 (38%) | ||
Laminin_EGF | 847..897 | CDD:278482 | 17/51 (33%) | ||
Laminin_EGF | 902..953 | CDD:278482 | 20/52 (38%) | ||
Laminin_EGF | 956..1004 | CDD:278482 | 18/230 (8%) | ||
Laminin_EGF | 1004..1050 | CDD:278482 | 17/49 (35%) | ||
V_Alix_like | 1122..1443 | CDD:187408 | 87/363 (24%) | ||
Tar | 1139..1521 | CDD:223910 | 99/427 (23%) | ||
BAR | 1308..1469 | CDD:299863 | 48/176 (27%) | ||
vATP-synt_E | 1474..>1629 | CDD:304907 | 36/156 (23%) | ||
LAMA3 | XP_011524280.1 | LamNT | 46..297 | CDD:214532 | 78/281 (28%) |
EGF_Lam | 299..344 | CDD:238012 | 21/47 (45%) | ||
Laminin_EGF | 356..423 | CDD:278482 | 22/67 (33%) | ||
EGF_Lam | 425..465 | CDD:238012 | 4/39 (10%) | ||
Laminin_EGF | 491..538 | CDD:278482 | 0/46 (0%) | ||
EGF_Lam | 535..577 | CDD:238012 | 17/41 (41%) | ||
Laminin_EGF | 585..628 | CDD:278482 | 1/42 (2%) | ||
EGF_Lam | 631..682 | CDD:238012 | 20/50 (40%) | ||
EGF_Lam | 684..727 | CDD:238012 | 4/42 (10%) | ||
Laminin_EGF | 1275..1323 | CDD:278482 | 21/53 (40%) | ||
EGF_Lam | 1365..1410 | CDD:238012 | 15/46 (33%) | ||
EGF_Lam | 1413..1463 | CDD:238012 | 22/60 (37%) | ||
LamB | 1523..1650 | CDD:214597 | 2/126 (2%) | ||
EGF_Lam | 1695..1741 | CDD:238012 | 17/48 (35%) | ||
Laminin_EGF | 1743..1793 | CDD:278482 | 2/49 (4%) | ||
Laminin_I | 1854..2113 | CDD:283627 | 53/267 (20%) | ||
Laminin_I | 2071..2357 | CDD:283627 | 83/338 (25%) | ||
ApoLp-III_like | 2101..2265 | CDD:304399 | 52/196 (27%) | ||
Laminin_II | 2297..2425 | CDD:283628 | 28/103 (27%) | ||
LamG | 2444..2579 | CDD:214598 | |||
LamG | 2611..2751 | CDD:238058 | |||
LamG | 2778..2910 | CDD:238058 | |||
LamG | 3003..3143 | CDD:238058 | |||
LamG | 3167..3318 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |