Sequence 1: | NP_001287009.1 | Gene: | LanB2 / 39118 | FlyBaseID: | FBgn0267348 | Length: | 1639 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101707.2 | Gene: | Lama1 / 316758 | RGDID: | 1307207 | Length: | 3083 | Species: | Rattus norvegicus |
Alignment Length: | 2241 | Identity: | 543/2241 - (24%) |
---|---|---|---|
Similarity: | 814/2241 - (36%) | Gaps: | 751/2241 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 GSSTARLLLIGVLFASCSTAILGAQRPPINSAGGHELRGTTFMPALECYDPYGRPQKCLPEFINA 74
Fly 75 AYQLQIESTNTCGEQNDNHFC-----IQTMNQNHKNCEFCKYNDHNPSF---LTDLHDPQSPTWW 131
Fly 132 QSETMFEGIQHPNYVNLTLHLGKSYDITYVRI-LFRSPRPESFTIYKRTSESGPWIPYQFYSAT- 194
Fly 195 --CRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLEGRPSGINFERSGELQEWV 257
Fly 258 TATDIRITLDRLNTFGDELFG---------DSQVLKSYFYAISDIAVGARCKCNGHASKCVPSTG 313
Fly 314 MHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANL---- 374
Fly 375 --FNRTGH---GGHCLDCRENRDGPNCERCKENFYM------RDDGYCVNCACDPVGSRSLQC-- 426
Fly 427 -NSH---------GKCQCKPGVTGDKCDRCDNNYYQFGPHG---CQQCGCDSGGSHQNTPACDTE 478
Fly 479 TGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPCFCYGHTSECMTAPGYSIVSVTSNFNKFKE 543
Fly 544 RWTAADL-------NQREVDIKYNQYSRSIGTTA---QGNEHVYFQAPDRFLGDQRASYNRDLKF 598
Fly 599 KLQL---VGQVANTGVS--DVILEGAGSRISLPIFAQGNGIPDQGVKEY--TFRL--HEHHDYQW 654
Fly 655 QPSQSARGFLSILSNLTAIKIRATYSVQGEAI--LDDVELQTAHRGAAG-HPATWIEQCTCPEGY 716
Fly 717 LGQFCESCAPGYRHSPA--RGGPFMPCIPCDCHGHADICDSETGRCI-CQHNTHGDNCDQCAKGF 778
Fly 779 YGNALGGTPNDCKRCPCP-----ND--GACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTG 836
Fly 837 LLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDR 901
Fly 902 CSCYEAGTEQDEQSITR-CDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYN 965
Fly 966 STCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGSKGFQCD-QNGQCPCNDNVE 1029
Fly 1030 GRRCDRCKENKY--DRHRGCIDC----------------------------------------PD 1052
Fly 1053 CY-------NLVQDAADLHRAK------------------------------------------- 1067
Fly 1068 LFNLSQTLDEI---ARTPVT--NDDEF-----EAKLKAVQEKVAVLAQDA--------------- 1107
Fly 1108 ------RDNSGD---------------------------------GGQTYAEVI----------- 1122
Fly 1123 ---------DDLHKHLDSVREHLVSADKF------------------------------------ 1142
Fly 1143 ----------------------------------------------------------------- 1142
Fly 1143 ----------------------------------------------------------------- 1142
Fly 1143 -------------------------------------QADANGEIDRAR---------------- 1154
Fly 1155 ------------------------------------------------------------QNYTI 1159
Fly 1160 ---------------LDQITENAKKELQQALDLLNDEGAQALARAKEKSVEFGQQSEQISDISRE 1209
Fly 1210 ARALADKLESEAQFDLKNAKDAKDAVEKAHQLAKSAIDLQLKIG-TELRSEVGLELSHVKQSLGT 1273
Fly 1274 V---VQTSKEALRKANEVYDTALTLLNDVNRQTQPEIDISQLKKDAVAANERADELLKQITELSN 1335
Fly 1336 SNGEL-------FADF-------ETEQELTEALLKRAEQQQLEDIELLERAKAAHDKATKAVEQG 1386
Fly 1387 DNTL-------------------KEANNTYEKLAGFQSDVQRSSESAEKALQTVPNIEKEI---- 1428
Fly 1429 ---QNAESLISQAEEALDGANKNANEAKKNAQ------EAQLKYAEQASKDAELIRR-------K 1477
Fly 1478 ANETKVAARNLREEAD----QLNHRVKLTEMDIFKLEESSTKDDNLVDDAKRKVGQAKADTQEAQ 1538
Fly 1539 KQIEKANADLTAIKDELENLKDINTGDLDRLENRLATVEGEINRVNLTGRIEKYREQRTIQKNLI 1603
Fly 1604 DKYDAELRELKDEVQNIG--------LISKA 1626 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB2 | NP_001287009.1 | LamNT | 61..296 | CDD:214532 | 73/255 (29%) |
EGF_Lam | 298..347 | CDD:238012 | 20/48 (42%) | ||
Laminin_EGF | 359..414 | CDD:278482 | 22/69 (32%) | ||
EGF_Lam | 414..458 | CDD:214543 | 25/58 (43%) | ||
Laminin_EGF | 461..511 | CDD:278482 | 22/49 (45%) | ||
LamB | 572..697 | CDD:214597 | 37/135 (27%) | ||
TNFRSF | <721..848 | CDD:304602 | 59/136 (43%) | ||
CRD2 | 724..771 | CDD:276900 | 23/49 (47%) | ||
EGF_Lam | 743..791 | CDD:238012 | 27/48 (56%) | ||
Laminin_EGF | 847..897 | CDD:278482 | 26/49 (53%) | ||
Laminin_EGF | 902..953 | CDD:278482 | 20/51 (39%) | ||
Laminin_EGF | 956..1004 | CDD:278482 | 23/47 (49%) | ||
Laminin_EGF | 1004..1050 | CDD:278482 | 14/48 (29%) | ||
V_Alix_like | 1122..1443 | CDD:187408 | 81/678 (12%) | ||
Tar | 1139..1521 | CDD:223910 | 94/736 (13%) | ||
BAR | 1308..1469 | CDD:299863 | 41/206 (20%) | ||
vATP-synt_E | 1474..>1629 | CDD:304907 | 38/172 (22%) | ||
Lama1 | NP_001101707.2 | LamNT | 25..275 | CDD:214532 | 77/283 (27%) |
EGF_Lam | 277..324 | CDD:238012 | 20/49 (41%) | ||
Laminin_EGF | 404..463 | CDD:278482 | 27/63 (43%) | ||
Laminin_EGF | 461..507 | CDD:278482 | 22/49 (45%) | ||
Laminin_B | 575..703 | CDD:278481 | 37/131 (28%) | ||
EGF_Lam | <715..739 | CDD:214543 | 12/23 (52%) | ||
EGF_Lam | 748..796 | CDD:238012 | 27/48 (56%) | ||
Laminin_EGF | 798..853 | CDD:278482 | 20/57 (35%) | ||
EGF_Lam | 855..907 | CDD:238012 | 26/53 (49%) | ||
Laminin_EGF | 909..955 | CDD:278482 | 20/51 (39%) | ||
Laminin_EGF | 958..1005 | CDD:278482 | 23/47 (49%) | ||
EGF_Lam | 1004..1049 | CDD:238012 | 14/47 (30%) | ||
Laminin_EGF | 1051..1099 | CDD:278482 | 4/47 (9%) | ||
Laminin_EGF | 1097..1154 | CDD:278482 | 3/56 (5%) | ||
Laminin_B | 1225..1351 | CDD:278481 | 12/125 (10%) | ||
Laminin_EGF | 1410..1456 | CDD:278482 | 0/45 (0%) | ||
Laminin_EGF | 1459..1513 | CDD:278482 | 0/53 (0%) | ||
Laminin_EGF | 1516..>1553 | CDD:278482 | 4/36 (11%) | ||
Laminin_I | 1574..1825 | CDD:283627 | 51/277 (18%) | ||
SPEC | 1613..1861 | CDD:295325 | 57/275 (21%) | ||
Laminin_I | 1838..2092 | CDD:283627 | 51/273 (19%) | ||
Laminin_II | 2018..2152 | CDD:283628 | 27/119 (23%) | ||
LamG | 2136..2285 | CDD:238058 | |||
LamG | 2314..2470 | CDD:238058 | |||
LamG | 2495..2659 | CDD:238058 | |||
Laminin_G_1 | 2751..2880 | CDD:278483 | |||
LamG | 2900..3053 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |