Sequence 1: | NP_001287009.1 | Gene: | LanB2 / 39118 | FlyBaseID: | FBgn0267348 | Length: | 1639 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001296376.1 | Gene: | Lama4 / 309816 | RGDID: | 1560062 | Length: | 1817 | Species: | Rattus norvegicus |
Alignment Length: | 995 | Identity: | 224/995 - (22%) |
---|---|---|---|
Similarity: | 385/995 - (38%) | Gaps: | 317/995 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 715 GYLGQFCESCAPG-YRHSPARGGPFMPCIPCDCHGHADICDSETGRCI-CQHNTHGDNCDQCAKG 777
Fly 778 FYGNALGGTPNDCKRCPCPND------GACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTG 836
Fly 837 LLGEVQTCKSCDCNGNVDPNAV-GNCNRTTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCD 900
Fly 901 RCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYN 965
Fly 966 ----STCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGSKGFQCDQNGQCPCND 1026
Fly 1027 NVEGRRCDRCKENKYDRHRGCIDCPDCYNLVQDAADLHRAKLFNLSQTLDEIARTPVTNDDEFEA 1091
Fly 1092 KLKAVQEKVAVLAQDARDNSGDGGQTYAEVIDDLHKHLDSVREHLVSADKFQADANGEID----- 1151
Fly 1152 -------------RARQNYTILDQITENAKKELQQALDLLNDEGAQALARAKEKSVEFGQQSEQI 1203
Fly 1204 SDISREARALAD-KLESEAQFDLKNAK--DAKDAVEKAHQLAKSAIDLQLKIGTELRSEVGLELS 1265
Fly 1266 HVKQSLGTVVQTSKEALRKANEVYDTALTLLNDVNRQTQPEIDISQLKKDAVAANERADELLKQI 1330
Fly 1331 TELSNSNGELFADFE-TEQELTEALLKRAEQQQLEDIELLERAKAAHDKATKAVEQGDNTLKEAN 1394
Fly 1395 ----------------------NTYEKLAGFQSDVQRSSESA----EKALQTVPNIEKEI----Q 1429
Fly 1430 NAESLISQAEEALDGANKNANEAKKNAQEAQLKYAEQASKDAELIRRKANETKVAARNLREEADQ 1494
Fly 1495 LNHRVKLTEMDIFKLEESSTKDDNLVDDAKRKVGQAKADTQEAQK-------------------- 1539
Fly 1540 ---QIEKANADLTAI---KDELENLKDINTGDLDRLENRLATVEGEINRVNLTGRIEKYREQRTI 1598
Fly 1599 QKNLIDKYDAELRELKDEVQ 1618 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB2 | NP_001287009.1 | LamNT | 61..296 | CDD:214532 | |
EGF_Lam | 298..347 | CDD:238012 | |||
Laminin_EGF | 359..414 | CDD:278482 | |||
EGF_Lam | 414..458 | CDD:214543 | |||
Laminin_EGF | 461..511 | CDD:278482 | |||
LamB | 572..697 | CDD:214597 | |||
TNFRSF | <721..848 | CDD:304602 | 48/134 (36%) | ||
CRD2 | 724..771 | CDD:276900 | 18/48 (38%) | ||
EGF_Lam | 743..791 | CDD:238012 | 19/48 (40%) | ||
Laminin_EGF | 847..897 | CDD:278482 | 22/50 (44%) | ||
Laminin_EGF | 902..953 | CDD:278482 | 10/50 (20%) | ||
Laminin_EGF | 956..1004 | CDD:278482 | 7/51 (14%) | ||
Laminin_EGF | 1004..1050 | CDD:278482 | 7/45 (16%) | ||
V_Alix_like | 1122..1443 | CDD:187408 | 72/372 (19%) | ||
Tar | 1139..1521 | CDD:223910 | 82/433 (19%) | ||
BAR | 1308..1469 | CDD:299863 | 38/191 (20%) | ||
vATP-synt_E | 1474..>1629 | CDD:304907 | 39/171 (23%) | ||
Lama4 | NP_001296376.1 | EGF_Lam | 81..130 | CDD:238012 | 19/48 (40%) |
EGF_Lam | 131..185 | CDD:238012 | 20/58 (34%) | ||
EGF_Lam | 187..238 | CDD:238012 | 22/52 (42%) | ||
Laminin_I | 289..547 | CDD:283627 | 61/374 (16%) | ||
SPEC | 314..523 | CDD:295325 | 48/281 (17%) | ||
ApoLp-III_like | 610..798 | CDD:304399 | 48/225 (21%) | ||
Laminin_II | 727..854 | CDD:283628 | 26/115 (23%) | ||
LamG | 853..1008 | CDD:214598 | |||
LamG | 1044..1202 | CDD:238058 | |||
LamG | 1232..1372 | CDD:238058 | |||
LamG | 1483..1618 | CDD:238058 | |||
LamG | 1642..1793 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |