Sequence 1: | NP_001287009.1 | Gene: | LanB2 / 39118 | FlyBaseID: | FBgn0267348 | Length: | 1639 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001094311.1 | Gene: | Lamb3 / 305078 | RGDID: | 1562668 | Length: | 1172 | Species: | Rattus norvegicus |
Alignment Length: | 1721 | Identity: | 332/1721 - (19%) |
---|---|---|---|
Similarity: | 547/1721 - (31%) | Gaps: | 725/1721 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 ILGAQRPPINSAGGHELRGTTFMPALECYDPYGRPQKCLPEFINAAYQLQIESTNTCGEQNDNHF 94
Fly 95 CIQTMNQNHKNCEFC------KYNDHNPSFLTDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLG 153
Fly 154 KSYDITYVRILFRSPRPESFTIYKRTSESG-PWIPYQFYSATCRDTYSLPDSRAIRKGEGEAHAL 217
Fly 218 CTSEYSDI----------SPLRDGEIAFSTLEGRPSGINFERSGELQEWVTATDIRITLDRLNTF 272
Fly 273 GDELFGDSQVLKSYFYAISDIAVGARCKCNGHASKCVPST-GMHGERTL-----VCECRHNTDGP 331
Fly 332 DCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANLF--NRTGHGGHCLDCRENRDGP 394
Fly 395 NCERCKENFYM-RDDG-----YCVNCACDPVGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQF 453
Fly 454 GPHGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPCFCYG 518
Fly 519 HTSECMTAPGYSIVSVTSNFNKFKERWTAADLNQREVDIKYNQYSRSIGTTAQGNEHVYFQAPDR 583
Fly 584 FLGDQRASYNRDLKFKLQLVGQVANTGVSDVILEGAGSRISLPIFAQGNGIPDQGVKEYTFRLHE 648
Fly 649 HHDYQWQPSQSARGFLSILSNLTAIKIRATYSVQGEAILDDVELQTAHRGAAGHPATWIEQCTCP 713
Fly 714 EGYLGQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQCAKGF 778
Fly 779 YGNALGGTPNDCKRCPCPNDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQT 843
Fly 844 CKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAG 908
Fly 909 TEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSG 973
Fly 974 QCHCRPGVMGQRCD-----QCENYFYGFSSEGCKPCECDESGSKGFQCDQ-NGQCPCNDNVEGRR 1032
Fly 1033 CDRCKENKYDRHRGCIDCPDCYNLVQDAADLHRAKLFNLSQTLDEIARTPVTNDDEFEAKLKAVQ 1097
Fly 1098 EKVAVLAQDARDNSGDGGQTYAE-VIDDLHKHLDSVREHL----------VSADKFQADANGEID 1151
Fly 1152 RARQNYTILDQITENAKKELQQALDLLNDEGA-QALARAKEKSVEFGQQSEQISDIS------RE 1209
Fly 1210 ARALADKLESEA-------------QFDLKNAKDAKDAVEK------------------------ 1237
Fly 1238 ----------AHQLAKSAIDLQLKIGTELRSEVGLELSHVKQSLGTVVQTSKEALRKANEVYDTA 1292
Fly 1293 LTLLNDVNR-QTQPEIDISQLKKDAVAANERADELLKQITELSNSNGEL---FADFETEQELTEA 1353
Fly 1354 LL-------------KRAEQQ----QLEDIEL--------LERAKAAHDKATKA----------- 1382
Fly 1383 ------VEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKALQTVPNIEKEIQNAESLISQAEEA 1441
Fly 1442 LDGANKNANEAKKNAQEAQLKYAEQASKDAELIRRKANETKVAARNLREEADQLNHRVKLTEMDI 1506
Fly 1507 FKLEESSTKDDNLVDDAKRKVGQAKADTQ----EAQKQIEKANADLTAIKD-ELENLKD-----I 1561
Fly 1562 NTGDLDRLENRLATVEGEINRVNLTGRIEKY 1592 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB2 | NP_001287009.1 | LamNT | 61..296 | CDD:214532 | 50/251 (20%) |
EGF_Lam | 298..347 | CDD:238012 | 26/54 (48%) | ||
Laminin_EGF | 359..414 | CDD:278482 | 21/62 (34%) | ||
EGF_Lam | 414..458 | CDD:214543 | 10/43 (23%) | ||
Laminin_EGF | 461..511 | CDD:278482 | 16/49 (33%) | ||
LamB | 572..697 | CDD:214597 | 3/124 (2%) | ||
TNFRSF | <721..848 | CDD:304602 | 0/126 (0%) | ||
CRD2 | 724..771 | CDD:276900 | 0/46 (0%) | ||
EGF_Lam | 743..791 | CDD:238012 | 0/47 (0%) | ||
Laminin_EGF | 847..897 | CDD:278482 | 0/49 (0%) | ||
Laminin_EGF | 902..953 | CDD:278482 | 18/50 (36%) | ||
Laminin_EGF | 956..1004 | CDD:278482 | 20/52 (38%) | ||
Laminin_EGF | 1004..1050 | CDD:278482 | 18/46 (39%) | ||
V_Alix_like | 1122..1443 | CDD:187408 | 80/430 (19%) | ||
Tar | 1139..1521 | CDD:223910 | 98/481 (20%) | ||
BAR | 1308..1469 | CDD:299863 | 44/205 (21%) | ||
vATP-synt_E | 1474..>1629 | CDD:304907 | 30/129 (23%) | ||
Lamb3 | NP_001094311.1 | Laminin_N | 21..249 | CDD:295486 | 55/277 (20%) |
EGF_Lam | 250..305 | CDD:238012 | 26/54 (48%) | ||
Laminin_EGF | 317..367 | CDD:278482 | 18/49 (37%) | ||
Laminin_EGF | 380..429 | CDD:278482 | 26/96 (27%) | ||
EGF_Lam | 431..480 | CDD:238012 | 25/440 (6%) | ||
Laminin_EGF | 482..535 | CDD:278482 | 20/52 (38%) | ||
EGF_Lam | 535..572 | CDD:214543 | 15/36 (42%) | ||
SPEC | 909..1092 | CDD:295325 | 45/203 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
2 | 1.870 |