DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and lamb1a

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:NP_775382.1 Gene:lamb1a / 286830 ZFINID:ZDB-GENE-021226-1 Length:1785 Species:Danio rerio


Alignment Length:1903 Identity:476/1903 - (25%)
Similarity:772/1903 - (40%) Gaps:505/1903 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 CLPE----FINAAYQLQIESTNTCGEQNDNHFCIQTMNQNHKNCEFC----KYND-------HN- 115
            |.|.    .|..|.||.  :|:|||......|||.:..|..|.|..|    .||:       |: 
Zfish    31 CYPATGDLLIGRAQQLL--ATSTCGVHKPEPFCIVSHLQEEKKCFVCDSRQAYNETAHQVTSHSI 93

  Fly   116 PSFLTDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRILFRSPRPESFTIYKRTS 180
            .:.:|.....:..||||||...|.      |.:.|.|...:..|::.:.|::.||.:..|.:...
Zfish    94 ENVVTTFAPNRLKTWWQSENGLEN------VTIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSAD 152

  Fly   181 ESGPWIPYQFYSATCRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLEGRPS-G 244
            ....|..|::::..|..::.......:.|.:   ..:|.:.||||.|..:||:.|..|:  |: .
Zfish   153 FGNTWQVYRYFAYDCESSFPSVSHGPMTKVD---DVICDTRYSDIEPSTEGEVIFRVLD--PAFR 212

  Fly   245 INFERSGELQEWVTATDIRITLDRLNTFGDELFGDS--QVLKSYFYAISDIAVGARCKCNGHASK 307
            |....|..:|..:..|::|:...:|:|.||.|. ||  ::.:.|:|||.|:.|...|.|.||||:
Zfish   213 IEDPYSPRIQNMLKITNLRVKFTKLHTLGDNLL-DSRIEIKEKYYYAIYDMVVRGNCFCYGHASE 276

  Fly   308 CVPSTG--------MHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGL 364
            |.|..|        :||.    |.|.|||.|.:|:||...|:||.|:.:.....|.||.|:||..
Zfish   277 CAPVDGTGEAVEGMVHGH----CMCNHNTIGLNCERCQDFYHDLPWRPAEGRNTNACKKCHCNHH 337

  Fly   365 ADKCFFDANLFNRTGH--GGHCLDCRENRDGPNCERCKENFY------MRDDGYCVNCACDPVGS 421
            :..|.||..::..:|:  ||.|.||:.|..|.|||:||..|:      :||...|..|.||||||
Zfish   338 SHSCHFDMAVYRASGNVSGGVCDDCQHNTMGHNCEQCKPFFHQHPEKDIRDPNICEPCNCDPVGS 402

  Fly   422 R-----------SLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFG--PHGCQQCGCDSGGSHQNTP 473
            .           ||...| |:|:|||.|.|::||:|...:|...  |.|||.|.|::.|:.....
Zfish   403 LNGGVCDPMTDVSLGLIS-GQCRCKPNVEGERCDQCKQGHYGLSEDPLGCQPCTCNALGTVPGGS 466

  Fly   474 ACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPCFC---------------------- 516
            .|||::|.|:||..|.||.|::|.|..:.| .|:..||.||.|                      
Zfish   467 PCDTDSGNCYCKRLVTGRNCDQCLPQHWGL-SNDMDGCRPCDCDHGGAINNNCSPVSGQCQCREH 530

  Fly   517 -YG--------------------HTSECMTAPGYSIVSVTSNFNKFKER---WTAADL------- 550
             :|                    ...|....||.::|.    .|..::|   ||....       
Zfish   531 MFGRRCDQVESGFYFIALDHYTYEAEEAKFGPGVTVVP----RNHPQDRSPTWTGIGFVNVPEGA 591

  Fly   551 ------------NQREVDIKY-----NQYSRSIGTTAQ--------------------------G 572
                        .:.::.|:|     .|:...:.|..:                          |
Zfish   592 FLEFSIDNIPYSMEYDLIIRYEPQLPEQWEEVLMTVIRPRVITADSRCANTMPDDDNQMVSLHPG 656

  Fly   573 NEHVYFQAPDRFLGDQRASYNRDLKFKLQLVGQVAN-----TGVSDVIL----------EGAGSR 622
            :.:|....|..|    ....|..::..|.|...:::     |.:..::|          .|:|:.
Zfish   657 SRYVVLPRPVCF----EEGLNYTVRLSLSLYSALSDVQSPYTLIDSIVLMPHCKNLDIFSGSGTE 717

  Fly   623 ISLPIFAQGNGIPDQGVKEY-TFRLHEHHDYQWQPSQS---------ARGFLSILSNLTAIKIRA 677
                   .||.:.:...:.: .:|..|:       ||:         .|.::..:|.|....::|
Zfish   718 -------GGNLVTNSAWENFQRYRCLEN-------SQAVVKTPMTDICRNYIFSVSALLHQGVKA 768

  Fly   678 TY-SVQGEAILDDVELQTAHRGAAGH----------------PATWI------------------ 707
            .. ..||       .|.|....:.|.                |||::                  
Zfish   769 CQCDPQG-------SLSTVCDPSGGQCQCRPNVVGRNCDRCAPATFLFXPQGCRPCDCSPEGSVH 826

  Fly   708 -------EQCTCPEGYLGQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCI-CQH 764
                   .||.|..|..|:.|:.|.|||       ..|..|.||.|:|||:.||.:||:|: |:.
Zfish   827 SYCHEATGQCECIAGAYGRQCDRCLPGY-------WGFPNCRPCTCNGHAEQCDPQTGQCLSCRD 884

  Fly   765 NTHGDNCDQCAKGFYGNALGGTPNDCKRCPCPN--------DGACLQINEDTVICTECPKGYFGS 821
            :|.|.||::|..|:||:.:.|:.:.|:.|.||:        .|||.:..:.:.:...|.:||.|:
Zfish   885 HTTGHNCERCLGGYYGDPVLGSGDHCRPCMCPDGPGSGRQFSGACYKSPDSSQVFCVCNQGYKGA 949

  Fly   822 RCEQCSDGFFGDPTGLLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLSG 886
            |||:|:.|::|:|..:.||   |:.|.||.|:|.....:|:..||.|:||:::|.||.|::|..|
Zfish   950 RCEECAPGYYGNPHEVGGE---CRPCQCNSNIDMMDPESCDARTGACVKCLYHTEGESCNRCRLG 1011

  Fly   887 HFGDPLALPHGRCDRCSCYEAGTEQD---EQSITRCDQVTGQCQCKPNVIGRDCGECQPGYFNIR 948
            ::|:.|.   ..|.:|.|.:.||.::   ......||..:|||.|.|||:|:.|.:|.|..:|:.
Zfish  1012 YYGNALT---QSCRKCVCNQMGTVEEMCPSPGNCNCDLTSGQCLCLPNVVGQHCDQCAPDTWNMA 1073

  Fly   949 SGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCECDESGSKG 1013
            ||.|||:|.|||..|:.|:|:...|||.|:||..|:.|.:|...|:|.....|..|:||..|...
Zfish  1074 SGKGCEDCDCDPNHSFGSSCNEIMGQCSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAE 1138

  Fly  1014 FQCDQ-NGQCPCNDNVEGRRCDRCKENKYDRHRGCIDCPDCY---------------NLVQDAAD 1062
            .||:: .|.|.|.:.|.|.|||.|..........|..|..|:               .|||....
Zfish  1139 QQCNKVTGHCVCVEGVSGPRCDTCARGYTGEFPQCERCHQCFAEWDIIVGDLTNQTHRLVQKVNT 1203

  Fly  1063 L--------HRAKLFNLSQTLDEI----ARTPVTND---------------DEFEAKLKAVQEKV 1100
            :        ::|.:.|:..:.:.|    |:.|.|..               .|..:.|...:|.:
Zfish  1204 IKATGITGPYQATINNVENSANSIRNILAQNPATQPLTEIQGLLEQATALMAEMNSNLNLTEETL 1268

  Fly  1101 AVLAQDARDNSGD--------GGQTYAEVIDDLHKHLDSVREHLVSADKFQADANGEIDRARQNY 1157
            :.::.|  :||.|        ..|...:.:.||.:.::.|:             |.:|..||.:.
Zfish  1269 SEISSD--NNSTDTKLKSLKEEAQKLEQTVKDLREQVEFVK-------------NSDIRGARASV 1318

  Fly  1158 TILDQITENAK----KELQQALDLLND------EGAQALARAKEKSVEFGQQSEQISDISREARA 1212
            |...:.::||:    .......:|:|.      |..:.:.:.||   ||.|:.:   :.|::...
Zfish  1319 TRYYEQSQNAEIRANASTTDPYNLVNQSATLRTETEELMNQTKE---EFNQRQD---EFSKKLDN 1377

  Fly  1213 LADKLESEAQFDL--------------KNAKDAKDAVEKAHQLAKSAIDLQ--LKIGTE------ 1255
            ||.:||:   .||              :|..|::..       ..|.:|:|  .|.|.|      
Zfish  1378 LAGQLET---LDLSELSEKTCGSPAGSENCADSRCG-------GLSCVDMQGSRKCGGEGCDGLT 1432

  Fly  1256 --------LRSEVGLELSHVKQSLGTVVQTSKEALRKANEVYDTALTLLNDVNRQTQPEIDISQL 1312
                    ...:..||:....:.:..:.:...||..||:|....|..:|...| :|:..:|    
Zfish  1433 TLAHNAWQKAKDFDLEIISAMEEVDKLSKMVSEAKVKADEAKLNAQEVLAKTN-ETKKRVD---- 1492

  Fly  1313 KKDAVAANERADELLKQITELSNSNGELFADFET-------------------EQELTEALLKRA 1358
                 ::||...:|:|||.:....:|   ||.|:                   .|.|||.:.:|.
Zfish  1493 -----SSNEELRQLIKQIRDFLTQDG---ADLESIEAVANEVLQMQMPTTPAQLQNLTEEIRERV 1549

  Fly  1359 EQQQLEDIE-LLERAKAAHDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKALQTVP 1422
              ..|.|:| :|.::.|...:|...:||.....|||           |||:.::|..::|||...
Zfish  1550 --GSLTDVEDILNQSAADILRAESLLEQARKARKEA-----------SDVKSTAEMVKEALQHAE 1601

  Fly  1423 NIEKEIQNAESLISQAEEALDGANKNANEAKKNAQEAQLKYAE------QASKDAELIRRKANET 1481
            ..:..:..|   :.||...:.|........:....:::||.:.      :...|..|::.||..|
Zfish  1602 RAQNSVAEA---LKQAAVDIKGTQDLLVSVESETSDSELKLSNATRRLLKLESDVALLKEKALNT 1663

  Fly  1482 KVAARNLREEADQLNHRVKLTEMDIFKLEESSTKDDNLVDDAKRKVGQAKADTQEAQKQIEKANA 1546
            .::|.:..:||:.:|...:..:.|:    :|..||.  ....:..:.|......||:|:.||   
Zfish  1664 SISANSTEKEAESINALAEQLKKDL----DSELKDK--YSTVEELITQKAEGVAEAKKRAEK--- 1719

  Fly  1547 DLTAIKDELENLKDINTGDLDRLENRLATVEGEINRVNLTGRIEKYREQRTIQKNLIDKYDAELR 1611
                :::|..||                              :.:..|:..:.|||...||...:
Zfish  1720 ----LQEEARNL------------------------------LLQASEKLQLLKNLEKNYDQNQK 1750

  Fly  1612 ELKDEVQNIGLISKALPD 1629
            .|:|:...:..:.||:.:
Zfish  1751 LLEDKANELVDLEKAVKE 1768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532 68/247 (28%)
EGF_Lam 298..347 CDD:238012 24/56 (43%)
Laminin_EGF 359..414 CDD:395007 23/62 (37%)
EGF_Lam 414..458 CDD:214543 22/56 (39%)
Laminin_EGF 461..511 CDD:395007 18/49 (37%)
LamB 572..697 CDD:214597 25/150 (17%)
EGF_Lam 743..791 CDD:238012 21/48 (44%)
EGF_Lam 793..836 CDD:214543 17/50 (34%)
Laminin_EGF 847..897 CDD:395007 19/49 (39%)
Laminin_EGF 902..953 CDD:395007 20/53 (38%)
EGF_Lam 956..1001 CDD:214543 18/44 (41%)
Laminin_EGF 1004..1046 CDD:395007 15/42 (36%)
SMC_prok_B <1054..1621 CDD:274008 131/682 (19%)
lamb1aNP_775382.1 Laminin_N 31..266 CDD:459653 69/248 (28%)
EGF_Lam 268..320 CDD:238012 24/55 (44%)
Laminin_EGF <353..382 CDD:395007 13/28 (46%)
EGF_Lam 394..452 CDD:238012 23/58 (40%)
EGF_Lam 453..504 CDD:238012 19/51 (37%)
EGF_Lam 505..548 CDD:238012 4/42 (10%)
EGF_Lam 769..814 CDD:214543 8/51 (16%)
Laminin_EGF 817..865 CDD:395007 14/54 (26%)
EGF_Lam 862..907 CDD:238012 21/44 (48%)
Laminin_EGF <934..969 CDD:395007 13/37 (35%)
Laminin_EGF 972..1018 CDD:395007 18/45 (40%)
Laminin_EGF 1024..1078 CDD:395007 20/53 (38%)
Laminin_EGF 1081..1129 CDD:395007 19/47 (40%)
Laminin_EGF 1129..>1168 CDD:395007 15/38 (39%)
Myosin_tail_1 1247..>1756 CDD:460256 122/611 (20%)
cc_LAMB1_C 1712..1784 CDD:411971 18/94 (19%)

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