DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and Ntn5

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:XP_006540948.1 Gene:Ntn5 / 243967 MGIID:2685330 Length:523 Species:Mus musculus


Alignment Length:609 Identity:138/609 - (22%)
Similarity:205/609 - (33%) Gaps:196/609 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 CYDPYGRPQKCLPEFINAAYQLQIESTNTCG--EQNDNHFCIQTMNQNHKNCEFCKYNDHNPSFL 119
            ||||.|||:.|||.......:.....:.||.  ..:....|                   |.|  
Mouse    37 CYDPGGRPRFCLPPVTQLVGKAAAPCSQTCALPAASPGPAC-------------------NSS-- 80

  Fly   120 TDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRILFRSPRPESFTIYKRTSESGP 184
                                        |||.|..|:.:|.|.:.|.:..|.:..:....:..||
Mouse    81 ----------------------------LTLDLDGSFLLTSVTLRFCTAGPPALVLSAAWATGGP 117

  Fly   185 WIPYQFYSATCRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLEGRPSGINFER 249
            |.|..                  |:                 |...|.:      |.|..:.|..
Mouse   118 WRPLW------------------RR-----------------PAWPGAL------GGPKKVTFHS 141

  Fly   250 SGELQEWVTATDIRITLDRLNTFGDELFGDSQVLKSYFYAISDIAVGARCKCNGHASKCVPSTGM 314
            ....:..:.|:.:|:      .||.:.            .:....|..||:|:|||::|  :|..
Mouse   142 PPGPKTRIVASYLRV------EFGGKA------------GLVTTGVRGRCQCHGHAARC--ATRA 186

  Fly   315 HGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANLFNRTG 379
            ...|   |.|||:|.||.|:.|.|.:.|..|:.:|....:.|..|:||..|.:|.|::.||..:|
Mouse   187 QPPR---CRCRHHTTGPGCESCRPSHRDWPWRPATPQHPHPCLPCSCNQHARRCRFNSELFRLSG 248

  Fly   380 --HGGHCLDCRENRDGPNCERCKENFYMRDDGY-------CVNCACDPVGSRSLQCN-SHGKCQC 434
              .||.|..||.:..|.:|..|:..|: ||...       |..|.|.|:|:....|| :.|:|.|
Mouse   249 GRSGGVCERCRHHTAGRHCHYCQPGFW-RDPSQPITSHKACRACQCHPIGATGGMCNQTSGQCSC 312

  Fly   435 KPGVTGDKCDRCDNNYYQF-GPHGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKP 498
            |.||||..|:||...|.|. .|.  ..|..:|.|:....|...|..    ....|..|...:|: 
Mouse   313 KLGVTGLTCNRCGPGYQQSRSPR--MPCQRESYGTRSRIPEATTTP----ATTPVASRSDPQCQ- 370

  Fly   499 GFFNLDKNNRFGCTPCFCYGHTSECMTAPGYSIVSVTSNFNKFKERWTAAD-LNQREVDIKYNQY 562
                                         ||..||| |:.:...:|:...| :...:|....:|.
Mouse   371 -----------------------------GYCNVSV-SSVHMSLQRYCQQDYVLHAQVSASSSQP 405

  Fly   563 SRSIG-------------------TTAQGNEHVYFQAPDRFLGDQRASYNRDLKFKLQLVGQVAN 608
            |.::|                   ...:|.:..:....|...|..|.....|    ..|:|:.|.
Mouse   406 SEAVGPEWWRLAVHVLAVFKQRAWPVRRGGQEAWVPRADLICGCLRLRPGAD----YLLLGRAAQ 466

  Fly   609 TGVSD------VILEGAGSRISLP 626
            |...|      :||...|  ::||
Mouse   467 THDDDNYDPARLILNRHG--LALP 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532 34/236 (14%)
EGF_Lam 298..347 CDD:238012 21/48 (44%)
Laminin_EGF 359..414 CDD:395007 21/63 (33%)
EGF_Lam 414..458 CDD:214543 20/45 (44%)
Laminin_EGF 461..511 CDD:395007 8/49 (16%)
LamB 572..697 CDD:214597 15/61 (25%)
EGF_Lam 743..791 CDD:238012
EGF_Lam 793..836 CDD:214543
Laminin_EGF 847..897 CDD:395007
Laminin_EGF 902..953 CDD:395007
EGF_Lam 956..1001 CDD:214543
Laminin_EGF 1004..1046 CDD:395007
SMC_prok_B <1054..1621 CDD:274008
Ntn5XP_006540948.1 EGF_Lam 172..216 CDD:238012 21/48 (44%)
EGF_Lam 227..281 CDD:238012 20/54 (37%)
EGF_Lam 290..339 CDD:238012 20/50 (40%)
NTR_netrin-1_like 384..509 CDD:239634 21/111 (19%)
Blue background indicates that the domain is not in the aligned region.

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