Sequence 1: | NP_001287009.1 | Gene: | LanB2 / 39118 | FlyBaseID: | FBgn0267348 | Length: | 1639 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035966.2 | Gene: | Lamc3 / 23928 | MGIID: | 1344394 | Length: | 1581 | Species: | Mus musculus |
Alignment Length: | 1686 | Identity: | 610/1686 - (36%) |
---|---|---|---|
Similarity: | 863/1686 - (51%) | Gaps: | 247/1686 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 57 CYDPYGRPQKCLPEFINAAYQLQIESTNTCGEQNDNHFC---------IQTMNQNHKNCEFCKYN 112
Fly 113 D----HNPSFLTDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRILFRSPRPESF 173
Fly 174 TIYKRTSESGPWIPYQFYSATCRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTL 238
Fly 239 EGRPSGINFERSGELQEWVTATDIRITLDRLNTFGDELFGDSQVLKSYFYAISDIAVGARCKCNG 303
Fly 304 HASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKC 368
Fly 369 FFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFY-MRDDGYCVNCACDPVGSRSLQCNSHGKC 432
Fly 433 QCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECK 497
Fly 498 PGFFNLDKNNRFGCTPCFCYGHTSECMTAPGYSIVSVTSNFNKFKERWTAADLNQREVDIKYNQY 562
Fly 563 SRSIGTTAQGNEHVYFQAPDRFLGDQRASYNRDLKFKLQLVGQVANTGVSDVI---LEGAGSRIS 624
Fly 625 LPIFAQGNGIPD-QGVK-----EYTFRLHEHHDYQWQPSQSARGFLSILSNLTAIKIRAT----- 678
Fly 679 YSVQGEAILDDVELQTA--HRGAAGHPATWIEQCTCPEGYLGQFCESCAPGYRHSPARGGPFMPC 741
Fly 742 IPCDCHGHADICDSETGRCICQHNTHGDNCDQCAKGFYGNALGGTPNDCKRCPCPNDGACLQINE 806
Fly 807 D-TVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECLK 870
Fly 871 CIHNTAGEHCDQCLSGHFGDPLAL-PHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIG 934
Fly 935 RDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSE 999
Fly 1000 GCKPCECDESGSKGFQCDQNGQCPCNDNVEGRRCDRCKENKY--DRHRGCIDCPDCYNLVQDAAD 1062
Fly 1063 LHRAKLFNLSQTLDEIARTPVTNDDEFEAKLKAVQEKVAVLAQDARDNSGDGGQTYAEVIDDLHK 1127
Fly 1128 HLDSVREHLVSADKFQA-----DANGEIDRARQNYTILDQIT--ENAKKELQQALDLLNDEGAQA 1185
Fly 1186 LARAKEKSVEFGQQSEQI----SDISREARALA---------------DKLESEAQFDLKNAKDA 1231
Fly 1232 KDAVEKAHQLAKSAID--------LQLKIGTELRSEVG---LELSHVKQSLGTVVQTSKEALRKA 1285
Fly 1286 NEVYDTALTLLND----VNRQTQPEIDISQLKKDAVAANERADELLKQITELSNSNGELFADFET 1346
Fly 1347 EQELTEALLKRAEQQQLEDIELLERAKAAHDKATKAVEQGDNTLKEANNTYEKLAG--FQSDVQR 1409
Fly 1410 SSESAEKALQTVPNIEKEIQNAESLISQAEEALDGANKNANEAKKNAQEAQLKYAEQASKDAELI 1474
Fly 1475 R----------RKANETKVAARNLR-------------EEADQLNHRVKLTEMDIFKLEESSTKD 1516
Fly 1517 DNLVDDAKRKVG-----QAKADT-QEAQKQIEKANADLT---AIKDELENLKDINTGDLDRLENR 1572
Fly 1573 LATVEGEINRVNLTGRIEKYREQRTIQKNLIDKYDAELRELKDEVQNIGLISKALPDSCFS 1633 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB2 | NP_001287009.1 | LamNT | 61..296 | CDD:214532 | 135/247 (55%) |
EGF_Lam | 298..347 | CDD:238012 | 27/48 (56%) | ||
Laminin_EGF | 359..414 | CDD:278482 | 26/55 (47%) | ||
EGF_Lam | 414..458 | CDD:214543 | 22/43 (51%) | ||
Laminin_EGF | 461..511 | CDD:278482 | 23/49 (47%) | ||
LamB | 572..697 | CDD:214597 | 44/140 (31%) | ||
TNFRSF | <721..848 | CDD:304602 | 66/127 (52%) | ||
CRD2 | 724..771 | CDD:276900 | 22/46 (48%) | ||
EGF_Lam | 743..791 | CDD:238012 | 23/47 (49%) | ||
Laminin_EGF | 847..897 | CDD:278482 | 26/50 (52%) | ||
Laminin_EGF | 902..953 | CDD:278482 | 22/50 (44%) | ||
Laminin_EGF | 956..1004 | CDD:278482 | 25/47 (53%) | ||
Laminin_EGF | 1004..1050 | CDD:278482 | 17/47 (36%) | ||
V_Alix_like | 1122..1443 | CDD:187408 | 70/363 (19%) | ||
Tar | 1139..1521 | CDD:223910 | 91/447 (20%) | ||
BAR | 1308..1469 | CDD:299863 | 34/162 (21%) | ||
vATP-synt_E | 1474..>1629 | CDD:304907 | 36/186 (19%) | ||
Lamc3 | NP_035966.2 | Laminin_N | 53..278 | CDD:278484 | 125/233 (54%) |
EGF_Lam | 279..326 | CDD:238012 | 28/50 (56%) | ||
Laminin_EGF | 336..392 | CDD:278482 | 26/55 (47%) | ||
EGF_Lam | 391..437 | CDD:238012 | 23/45 (51%) | ||
Laminin_EGF | 439..486 | CDD:278482 | 23/49 (47%) | ||
Laminin_B | 550..669 | CDD:278481 | 41/129 (32%) | ||
EGF_Lam | 718..765 | CDD:238012 | 23/47 (49%) | ||
EGF_Lam | 766..814 | CDD:238012 | 28/47 (60%) | ||
Laminin_EGF | 822..>864 | CDD:278482 | 23/41 (56%) | ||
Laminin_EGF | 878..925 | CDD:278482 | 22/50 (44%) | ||
Laminin_EGF | 928..976 | CDD:278482 | 25/47 (53%) | ||
EGF_Lam | 976..1022 | CDD:238012 | 16/45 (36%) | ||
Domain II and I | 1025..1581 | 130/656 (20%) | |||
Laminin_I | 1225..1470 | CDD:283627 | 56/260 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1382..1413 | 10/30 (33%) | |||
GluZincin | 1433..>1506 | CDD:301352 | 15/72 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 290 | 1.000 | Domainoid score | I1542 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48740 | |
OrthoDB | 1 | 1.010 | - | - | D156553at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002861 | |
OrthoInspector | 1 | 1.000 | - | - | otm43551 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102334 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.730 |