DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and Ntn3

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:NP_035077.1 Gene:Ntn3 / 18209 MGIID:1341188 Length:580 Species:Mus musculus


Alignment Length:499 Identity:174/499 - (34%)
Similarity:243/499 - (48%) Gaps:76/499 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLLIGVLFASCSTAILGAQRPPINSAGGHELRGTTFMPALECYDPYGRPQKCLPEFINAAYQLQI 80
            ||..|.|.|:.|..:..:..|                    |||....|:.|:|..:|||...::
Mouse     9 LLTAGTLSAALSPGLPASADP--------------------CYDEAREPRSCIPGLVNAALGREV 53

  Fly    81 ESTNTCGEQNDNHFCIQTMNQNHKNCEFCKYNDHNPSFLTDLHDPQSPTWWQSETMFEGIQHPNY 145
            .:::||| ::.|..|..:..|          ..|:...||......||..|:|:.:   .|.|..
Mouse    54 LASSTCG-RSANRVCDSSDPQ----------RAHSADLLTSAPGTASPLCWRSDLL---QQAPFN 104

  Fly   146 VNLTLHLGKSYDITYVRILFRSPRPESFTIYKRTSESGPWIPYQFYSATCRDTYS-LPDSRAIRK 209
            |.||:.|||::::.:|.:.|.|..|.|..:.|.......|:|..|:|::|...|. ||.......
Mouse   105 VTLTVPLGKAFELVFVSLRFCSAPPTSVALLKSQDHGRSWVPLGFFSSSCTLDYGRLPAPADGPS 169

  Fly   210 GEGEAHALCTSEYSDISPLRDGEIAFSTLEGRPSGINFERSGELQEWVTATDIRITLDRLNTFGD 274
            |.| ..|||... ....|...|.:|||..:|.|.|::.:.|..||:|||||||||.|.|....||
Mouse   170 GPG-PEALCFPA-PQAQPDGGGLLAFSVQDGSPQGLDLDNSPVLQDWVTATDIRIVLTRPAIQGD 232

  Fly   275 ELFGDSQVLKSYFYAISDIAVGARCKCNGHASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPL 339
            .  .|..|...|.|:.:::.||.|||||||||:|:..|  ||.  |||:|:|.|:||||.||.|.
Mouse   233 T--RDGGVTVPYSYSATELQVGGRCKCNGHASRCLLDT--HGH--LVCDCQHGTEGPDCSRCKPF 291

  Fly   340 YNDLKWKRSTSTEVNECKACNCNGLADKCFFDANLFNRTGH--GGHCLDCRENRDGPNCERCKEN 402
            |.|..|:|:|..|.:.|.||:|||.|.:|.|:..|:..:|.  ||.||:||.|..|.:|..|:|.
Mouse   292 YCDRPWQRATGQEAHACLACSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREG 356

  Fly   403 FYMRDDG-------YCVNCACDPVGSRSLQCN-SHGKCQCKPGVTGDKCDRCDNNYYQ----FGP 455
            || ||.|       .|..|.|.|||:....|| :.|:|.||.||||..|:||...:.|    ..|
Mouse   357 FY-RDPGRVLSDRRACRACDCHPVGAAGKTCNQTTGQCPCKDGVTGLTCNRCAPGFQQSRSPVAP 420

  Fly   456 HGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRC-NECKP 498
              |.:... .|.:.:::|              ||.:.| :.|:|
Mouse   421 --CVKTPV-PGPTEESSP--------------VEPQDCESHCRP 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532 74/235 (31%)
EGF_Lam 298..347 CDD:238012 29/48 (60%)
Laminin_EGF 359..414 CDD:395007 26/63 (41%)
EGF_Lam 414..458 CDD:214543 20/48 (42%)
Laminin_EGF 461..511 CDD:395007 7/39 (18%)
LamB 572..697 CDD:214597
EGF_Lam 743..791 CDD:238012
EGF_Lam 793..836 CDD:214543
Laminin_EGF 847..897 CDD:395007
Laminin_EGF 902..953 CDD:395007
EGF_Lam 956..1001 CDD:214543
Laminin_EGF 1004..1046 CDD:395007
SMC_prok_B <1054..1621 CDD:274008
Ntn3NP_035077.1 Laminin_N 34..253 CDD:470680 75/236 (32%)
EGF_Lam 254..299 CDD:238012 29/48 (60%)
Laminin_EGF 311..362 CDD:395007 24/51 (47%)
EGF_Lam 373..422 CDD:238012 20/50 (40%)
NTR_netrin-1_like 456..562 CDD:239634
Cell attachment site, atypical. /evidence=ECO:0000255 500..502
Blue background indicates that the domain is not in the aligned region.

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