Sequence 1: | NP_001287009.1 | Gene: | LanB2 / 39118 | FlyBaseID: | FBgn0267348 | Length: | 1639 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001294008.1 | Gene: | epi-1 / 177956 | WormBaseID: | WBGene00001328 | Length: | 3715 | Species: | Caenorhabditis elegans |
Alignment Length: | 1675 | Identity: | 422/1675 - (25%) |
---|---|---|---|
Similarity: | 650/1675 - (38%) | Gaps: | 421/1675 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 QNDNHFCIQTMNQNHKNCEFCKYNDHNPSFLTDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLG 153
Fly 154 KSYDITYVRILFR-SPRPE----------SFTIYKRTSESGP-------WIPYQFYSATCRDTYS 200
Fly 201 LPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLEGRPSGINFERSGELQEWVTATDIRIT 265
Fly 266 LDRLNTFGDELFGDSQVLKSYFYAISDI-------------AVGARCKCNGHASKCVPSTGMHGE 317
Fly 318 RTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANLFNRTGHGG 382
Fly 383 HCLDCRENRDGPNCERCKENFYMRDDGY-----CVNCACDPVGSR--SLQCN-SHGKCQCKPGVT 439
Fly 440 GDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLD 504
Fly 505 KNNRFGCTPCFCYGHTSECMTAPGYSIVSVTSNFNKFKERWTAADLNQREVDIKYNQYSRSIGTT 569
Fly 570 AQGNEHVYFQAPDRFLGDQRASYNRDLKFKLQLV---GQVANTGVSDVILEGAGSRISLPIFAQG 631
Fly 632 NGIPDQGVKEYTFRLHEHHDYQWQPSQ--SARG-------FLSILSNLTAIKIRATYSVQGEAIL 687
Fly 688 DDVELQTAHRGA--AGHP--------ATWIEQCTCPEGYLGQFCESCAPGYRHSPARGGPFM-PC 741
Fly 742 IPCDCHGHADICDSETGRCI-CQHNTHGDNCDQCAKGFYGNALGGTPNDCKRCPCP--------- 796
Fly 797 -----NDGACLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTGLLGEVQTCKSCDCNGNVDPN 856
Fly 857 AVGNCNRTTGECLKCIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQ 921
Fly 922 VTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRC 986
Fly 987 DQCENYFYGFSSEGCKPCECDESGSKGFQCD-QNGQCPCNDNVEGRRCDRCKENKYDR--HRGCI 1048
Fly 1049 DCPDC-YNLVQDAADL-------------------------HRAKLFNLSQTLDEIARTPVTNDD 1087
Fly 1088 EFEAKLKAVQEKVAVLAQDARDNSGDGGQTYAEVIDDLHKHLDSVREHLVSADKFQADANGEIDR 1152
Fly 1153 ARQNYTILDQIT----ENAK---------KELQQALDLLN-------DEGAQAL--------ARA 1189
Fly 1190 KEKSVEFGQQSEQISDISREARALADKLESEAQFDLKNAKDAKDAVEKAHQLAKSAIDLQLKIGT 1254
Fly 1255 ELRSEVGLELSHVK------QSLGTVVQTSKEALRKANEVYDTALTLLNDVNRQTQPEIDISQLK 1313
Fly 1314 -------KDAVAANERADELLKQITELSNSNGELFADFETEQELTEALLKRAEQ-QQLEDIELLE 1370
Fly 1371 RAKAAHDKATKAVEQGDNTLKEANN---------TYEKLAGFQSDVQ---RSSESAEKALQTVPN 1423
Fly 1424 IEKEIQNAESLI-----SQAEEALDGANKNANEAKK-------NAQEAQLKYAEQASKDAELIRR 1476
Fly 1477 KANETKVAARNLREEADQLNHRVKLTEMDIFKLEESSTKDDNLVDDAKRKVGQAKADTQEAQKQI 1541
Fly 1542 EKANADLTAIKDELENLKDINTGDLDRLENRLATVEGEINRVNLTGRIEK 1591 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB2 | NP_001287009.1 | LamNT | 61..296 | CDD:214532 | 38/237 (16%) |
EGF_Lam | 298..347 | CDD:238012 | 12/48 (25%) | ||
Laminin_EGF | 359..414 | CDD:278482 | 17/59 (29%) | ||
EGF_Lam | 414..458 | CDD:214543 | 19/46 (41%) | ||
Laminin_EGF | 461..511 | CDD:278482 | 20/49 (41%) | ||
LamB | 572..697 | CDD:214597 | 32/136 (24%) | ||
TNFRSF | <721..848 | CDD:304602 | 57/142 (40%) | ||
CRD2 | 724..771 | CDD:276900 | 23/48 (48%) | ||
EGF_Lam | 743..791 | CDD:238012 | 26/48 (54%) | ||
Laminin_EGF | 847..897 | CDD:278482 | 18/49 (37%) | ||
Laminin_EGF | 902..953 | CDD:278482 | 15/50 (30%) | ||
Laminin_EGF | 956..1004 | CDD:278482 | 18/47 (38%) | ||
Laminin_EGF | 1004..1050 | CDD:278482 | 19/48 (40%) | ||
V_Alix_like | 1122..1443 | CDD:187408 | 73/379 (19%) | ||
Tar | 1139..1521 | CDD:223910 | 98/447 (22%) | ||
BAR | 1308..1469 | CDD:299863 | 37/192 (19%) | ||
vATP-synt_E | 1474..>1629 | CDD:304907 | 25/118 (21%) | ||
epi-1 | NP_001294008.1 | LamNT | 24..296 | CDD:214532 | |
EGF_Lam | 297..345 | CDD:238012 | |||
Laminin_EGF | 427..474 | CDD:278482 | |||
EGF_Lam | 471..520 | CDD:238012 | |||
EGF_Lam | 519..564 | CDD:214543 | |||
Laminin_EGF | 564..612 | CDD:278482 | |||
Laminin_EGF | 610..658 | CDD:278482 | |||
Laminin_EGF | 656..703 | CDD:278482 | |||
Laminin_EGF | 701..753 | CDD:278482 | |||
Laminin_EGF | 756..806 | CDD:278482 | |||
EGF_Lam | 808..854 | CDD:238012 | |||
CBM6-CBM35-CBM36_like | 855..988 | CDD:271143 | |||
EGF_Lam | 1425..1468 | CDD:238012 | 12/56 (21%) | ||
EGF_Lam | 1472..1515 | CDD:238012 | 16/57 (28%) | ||
Laminin_EGF | 1517..1567 | CDD:278482 | 21/51 (41%) | ||
Laminin_EGF | 1565..1613 | CDD:278482 | 20/49 (41%) | ||
LamB | 1669..1793 | CDD:214597 | 32/148 (22%) | ||
EGF_Lam | 1840..1883 | CDD:238012 | 23/42 (55%) | ||
Laminin_EGF | 1891..1945 | CDD:278482 | 21/64 (33%) | ||
EGF_Lam | 1947..1998 | CDD:238012 | 18/52 (35%) | ||
EGF_Lam | 2001..2045 | CDD:214543 | 15/50 (30%) | ||
EGF_Lam | 2048..2092 | CDD:214543 | 16/44 (36%) | ||
EGF_Lam | 2095..2140 | CDD:214543 | 17/45 (38%) | ||
Tar | <2145..2378 | CDD:223910 | 49/250 (20%) | ||
BAR | 2289..2486 | CDD:299863 | 45/210 (21%) | ||
Apolipoprotein | 2289..2472 | CDD:279749 | 41/189 (22%) | ||
COG1340 | 2414..2690 | CDD:224259 | 66/313 (21%) | ||
ApoLp-III_like | 2510..2635 | CDD:304399 | 24/125 (19%) | ||
Laminin_II | 2589..2730 | CDD:283628 | 37/161 (23%) | ||
LamG | 2704..2875 | CDD:238058 | 2/6 (33%) | ||
LamG | 2909..3057 | CDD:238058 | |||
LamG | 3353..3510 | CDD:238058 | |||
LamG | 3532..3682 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 61 | 1.000 | Domainoid score | I6930 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |