Sequence 1: | NP_001287009.1 | Gene: | LanB2 / 39118 | FlyBaseID: | FBgn0267348 | Length: | 1639 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006525748.1 | Gene: | Lama3 / 16774 | MGIID: | 99909 | Length: | 3331 | Species: | Mus musculus |
Alignment Length: | 2541 | Identity: | 505/2541 - (19%) |
---|---|---|---|
Similarity: | 789/2541 - (31%) | Gaps: | 1116/2541 - (43%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 LLLIGVLFASCSTAILGAQRPPINSAGGHELRGTTFMPALECYDPYGRPQKCLPEFINAAYQLQI 80
Fly 81 ESTNTCGEQN-------DNHFC-----IQTMNQNH----KNCEFCKYND----HNPSFLTDLHDP 125
Fly 126 QSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRILF-RSPRPESFTIYKRTSESGPWIPYQ 189
Fly 190 FYSAT---CRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLEGRPSGINFERSG 251
Fly 252 ELQEWVTATDIRITLDRLNTFGDELFG----DSQVLKSYFYAISDIAVGARCKCNGHASKCVPST 312
Fly 313 GMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNCNGLADKCFFDANL--- 374
Fly 375 ---FNRTG---HGGHCLDCRENRDGPNCERCKENFYMRDDGY-------CVNCACDP-------- 418
Fly 419 ----------------------------------------------------------------- 418
Fly 419 -------------------------------------VGSRSLQCN-SHGKCQCKPGVTGDKCDR 445
Fly 446 CDNNYYQF-----------------------------------------------GPHGCQQCGC 463
Fly 464 DSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPC----------FCYG 518
Fly 519 HTSECM--------------------------------TAP--------------------GYSI 531
Fly 532 VSVTSN----------------------------------------------------FNKFKE- 543
Fly 544 -------------------RWTA------------------------------------------ 547
Fly 548 --------------------------------------------ADLNQREVDIKYN-------- 560
Fly 561 -----QYS-------------RSIGTTAQGNEHVY---FQAPDR--------------FLGDQRA 590
Fly 591 SYNRDLKFKLQLV------------------------------GQVANTGVSDVILEGAGSRISL 625
Fly 626 PIFAQGNGI----------PDQGVK------------------EYTFRLH----EHHDY------ 652
Fly 653 ----QWQPSQSARGFLS------------ILS-----------------------NLTAIKIRAT 678
Fly 679 ------YSVQGEAILDD--------------VELQTA---------------HRGA--------- 699
Fly 700 -AGH---PATWIEQCTCPEGYLGQFCESCAPGYRHSPARGGPFMPCIPCDC-------------- 746
Fly 747 -------------------HGHA--DI---------------CDSETGRCICQHNTHGDNCDQCA 775
Fly 776 KGFYGNALGGTPNDCKRCPCPNDG----ACLQINEDTVICTECPKGYFGSRCEQCSDG-FFGDPT 835
Fly 836 GLLGEVQTCKSCDCNG-NVD--------------------------------------------- 854
Fly 855 PNAVGNCN-----------------------------------------RTTGECLKCIH----- 873
Fly 874 ----------------------------------------------------------------- 873
Fly 874 -------------------NTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEAGTEQDEQSITRC 919
Fly 920 DQVTGQC-QCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTC--DRYSGQCHCRPGV 981
Fly 982 MGQRCDQCENYFYGFSSE---GCKPCECDESGSKGFQCDQ-NGQCPCNDNVEGRRCDRCKENKYD 1042
Fly 1043 RHRGCIDCPDC-YNLVQDAAD------LHRAKLFNLSQT---LDEIARTPVTNDDEFEAKLKAVQ 1097
Fly 1098 EKVAVLAQDARD--------NSGDGGQTYAEVIDDLHKHLDSV-REHLVSADKFQADANGEIDRA 1153
Fly 1154 RQNYTILDQITENAK------KELQQALDLLNDEGAQALARAKEKSVEFGQQSEQISDISREARA 1212
Fly 1213 L-------------ADKLESEAQFD----------------LKNAKDAKDAVEKAHQLAKSAIDL 1248
Fly 1249 QLKIGTELRSEVGLELSHVKQS-LGTVVQTSKEALRKANE------VYDTALTLLNDVNRQTQPE 1306
Fly 1307 IDISQLKKDAVAA--NERADELLKQITELSNSNGE--LFADFETEQELTEALLKRAEQQQLEDIE 1367
Fly 1368 LL----ERAKAAHDKATKAVEQGDNTLKEANNTYEKLAGFQSDVQRSSESAEKALQTVPNIEKEI 1428
Fly 1429 -QNAESLISQAEEALDGANKNANEAKKNAQEAQLKYAEQASKDAELIRRKANETKVAARNLREEA 1492
Fly 1493 DQLNHRVKLTEMDIFKLEESSTKDDNLVDDAKRKVGQAKADTQEAQKQIEKANADLTAIKDELEN 1557
Fly 1558 ---------LKDINTGDLDRLENRLATVEGEINRVNLTGRIEKYREQRTIQKNLIDKYDAELREL 1613
Fly 1614 KDEVQN 1619 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LanB2 | NP_001287009.1 | LamNT | 61..296 | CDD:214532 | 79/262 (30%) |
EGF_Lam | 298..347 | CDD:238012 | 21/48 (44%) | ||
Laminin_EGF | 359..414 | CDD:278482 | 23/70 (33%) | ||
EGF_Lam | 414..458 | CDD:214543 | 21/201 (10%) | ||
Laminin_EGF | 461..511 | CDD:278482 | 20/49 (41%) | ||
LamB | 572..697 | CDD:214597 | 35/283 (12%) | ||
TNFRSF | <721..848 | CDD:304602 | 46/181 (25%) | ||
CRD2 | 724..771 | CDD:276900 | 19/96 (20%) | ||
EGF_Lam | 743..791 | CDD:238012 | 19/97 (20%) | ||
Laminin_EGF | 847..897 | CDD:278482 | 18/225 (8%) | ||
Laminin_EGF | 902..953 | CDD:278482 | 13/51 (25%) | ||
Laminin_EGF | 956..1004 | CDD:278482 | 14/52 (27%) | ||
Laminin_EGF | 1004..1050 | CDD:278482 | 10/46 (22%) | ||
V_Alix_like | 1122..1443 | CDD:187408 | 87/372 (23%) | ||
Tar | 1139..1521 | CDD:223910 | 91/432 (21%) | ||
BAR | 1308..1469 | CDD:299863 | 47/169 (28%) | ||
vATP-synt_E | 1474..>1629 | CDD:304907 | 33/155 (21%) | ||
Lama3 | XP_006525748.1 | LamNT | 40..294 | CDD:214532 | 82/285 (29%) |
EGF_Lam | 295..343 | CDD:238012 | 21/50 (42%) | ||
EGF_Lam | 352..420 | CDD:238012 | 23/68 (34%) | ||
EGF_Lam | 422..462 | CDD:238012 | 4/39 (10%) | ||
Laminin_EGF | 488..535 | CDD:365839 | 0/46 (0%) | ||
EGF_Lam | 532..574 | CDD:238012 | 15/41 (37%) | ||
Laminin_EGF | 628..678 | CDD:365839 | 20/49 (41%) | ||
EGF_Lam | 681..724 | CDD:238012 | 4/42 (10%) | ||
Laminin_EGF | 1263..1311 | CDD:365839 | 18/56 (32%) | ||
EGF_Lam | 1308..1349 | CDD:238012 | 4/40 (10%) | ||
Laminin_EGF | 1353..1404 | CDD:365839 | 15/56 (27%) | ||
EGF_Lam | 1401..1451 | CDD:238012 | 17/57 (30%) | ||
LamB | 1509..1638 | CDD:214597 | 5/128 (4%) | ||
EGF_Lam | 1683..1729 | CDD:238012 | 13/53 (25%) | ||
EGF_Lam | 1731..1782 | CDD:238012 | 13/50 (26%) | ||
Laminin_I | 1844..2101 | CDD:310534 | 59/295 (20%) | ||
SMC_prok_B | <2062..>2329 | CDD:274008 | 72/308 (23%) | ||
Laminin_II | 2285..2413 | CDD:368703 | 27/106 (25%) | ||
LamG | 2432..2567 | CDD:214598 | |||
LamG | 2599..2739 | CDD:238058 | |||
LamG | 2766..2898 | CDD:238058 | |||
LamG | 2990..3132 | CDD:238058 | |||
LamG | 3156..3307 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |