DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and LOC1275280

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:XP_314518.4 Gene:LOC1275280 / 1275280 VectorBaseID:AGAMI1_006197 Length:385 Species:Anopheles gambiae


Alignment Length:347 Identity:79/347 - (22%)
Similarity:124/347 - (35%) Gaps:88/347 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   416 CDPVG-------SRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQ--QCGCDSGGSHQN 471
            |:||.       |:|....|:|:..| |.|..:...|    |..:|..|.:  |.......:.|.
Mosquito    63 CNPVWYFNGRPVSKSRCIPSYGELVC-PSVKREDAGR----YDLWGGDGSRHSQARLIFSANVQV 122

  Fly   472 TPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPCFCYGHTSECMTAPGYSIVSVTS 536
            |.|.:.:    ..||.:  .:..:..|.||  ::.||.. ..|||.|.|..|..|.....:..|.
Mosquito   123 TRAVERD----LPKERI--AKVQDEPPPFF--ERKNRVE-NDCFCSGVTERCRMALDLYRMRKTY 178

  Fly   537 NFNKFKERWTAADLNQREVDIKYNQYSRSIGTTAQGNEHVYFQAPDRFLGDQRASYNRDLKFKLQ 601
            :.:..    ||..|.......||.:...|:                 .||:...:|...::|.  
Mosquito   179 DLSNL----TAVRLGGESSGAKYIRIPLSV-----------------LLGNLITAYGGYMRFP-- 220

  Fly   602 LVGQVANTGVSDVILEGAGSRISLPIF----------AQGNGIP---DQG-----VKEYTFRLHE 648
                         :.|...:..|.|..          |.|..:|   ||.     :||..::|..
Mosquito   221 -------------VTEECYTDRSKPCVVMVDKRNMHRAVGYFLPTSHDQRQVQVLLKESNWKLLP 272

  Fly   649 HHDYQWQPSQSARG-------FLSILSNLTAIKIRATYSVQGEAILDDVELQTAHRGAAGHPATW 706
            ..|   :.|....|       |:|.|||:.::.||..|..:.|..:..:::.:::....| ..|.
Mosquito   273 AID---ELSDRDSGDELTKFIFMSTLSNIHSVYIRGRYRTRSEENILSIDMASSYDEGLG-TVTT 333

  Fly   707 IEQCTCPEGYLGQFCESCAPGY 728
            :|:|.|..||.|..||.|..||
Mosquito   334 VEECDCHPGYGGLSCERCEKGY 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532
EGF_Lam 298..347 CDD:238012
Laminin_EGF 359..414 CDD:395007
EGF_Lam 414..458 CDD:214543 13/48 (27%)
Laminin_EGF 461..511 CDD:395007 10/49 (20%)
LamB 572..697 CDD:214597 27/149 (18%)
EGF_Lam 743..791 CDD:238012
EGF_Lam 793..836 CDD:214543
Laminin_EGF 847..897 CDD:395007
Laminin_EGF 902..953 CDD:395007
EGF_Lam 956..1001 CDD:214543
Laminin_EGF 1004..1046 CDD:395007
SMC_prok_B <1054..1621 CDD:274008
LOC1275280XP_314518.4 None
Blue background indicates that the domain is not in the aligned region.

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