DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and LanB2

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:XP_308240.3 Gene:LanB2 / 1269597 VectorBaseID:AGAMI1_007290 Length:1624 Species:Anopheles gambiae


Alignment Length:70 Identity:16/70 - (22%)
Similarity:25/70 - (35%) Gaps:15/70 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPLPNYKTF------ESNSRSI 84
            :|...|...|.|..:.:.||......:.|       :..|||  |....|:.      |:.:.|.
Mosquito   552 LYSSKTMVSWRNFVERLQGKEPRTRAQAY-------VXYETG--PAGGAKSTPLTPDPEAANESY 607

  Fly    85 NDFDT 89
            .:|.|
Mosquito   608 LEFST 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532 9/35 (26%)
EGF_Lam 298..347 CDD:238012
Laminin_EGF 359..414 CDD:395007
EGF_Lam 414..458 CDD:214543
Laminin_EGF 461..511 CDD:395007
LamB 572..697 CDD:214597
EGF_Lam 743..791 CDD:238012
EGF_Lam 793..836 CDD:214543
Laminin_EGF 847..897 CDD:395007
Laminin_EGF 902..953 CDD:395007
EGF_Lam 956..1001 CDD:214543
Laminin_EGF 1004..1046 CDD:395007
SMC_prok_B <1054..1621 CDD:274008
LanB2XP_308240.3 Laminin_N 50..280 CDD:459653
EGF_Lam 281..328 CDD:238012
Laminin_EGF 342..397 CDD:395007
EGF_Lam 397..441 CDD:214543
Laminin_EGF 444..494 CDD:395007
Laminin_B 560..692 CDD:459652 14/62 (23%)
EGF_Lam 727..769 CDD:238012
Laminin_EGF 831..881 CDD:395007
Laminin_EGF 886..937 CDD:395007
EGF_Lam 940..985 CDD:214543
Laminin_EGF 988..1030 CDD:395007
SMC_prok_B <1046..>1606 CDD:274008
Blue background indicates that the domain is not in the aligned region.

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