DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and ntng1

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:XP_031756887.1 Gene:ntng1 / 100494090 XenbaseID:XB-GENE-981283 Length:541 Species:Xenopus tropicalis


Alignment Length:512 Identity:133/512 - (25%)
Similarity:198/512 - (38%) Gaps:138/512 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 CLPEFINAAYQLQIE---STNTCGEQNDNHFCIQTMNQNHKNCEFCKYND----HNPSFLTDLHD 124
            |.||.|:....::::   ..:|||:..: .||  .|...:.....|..|.    |.|..:.|:..
 Frog    46 CQPESIDMTKYMRVKLDPPDSTCGDPPE-AFC--AMGNPYMCNNECDANTQELAHPPDLMFDVEG 107

  Fly   125 PQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDIT-YVRILFRSPRPESFTIYKRTSESGPWIPY 188
            ....|:|||:| ::....|..||:||...|:.::| .|.|.|.|.|||...:.|.......|.||
 Frog   108 RNPSTFWQSKT-WKHYPKPLQVNITLSWNKTIELTNNVAITFESGRPEKMVLEKSLDYGRTWQPY 171

  Fly   189 QFYSATCRDTYSL-PDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFS-----TLEGRPSGIN- 246
            |||:|.|.|.:.: |.|............:||.|||.........::|.     .:...|...| 
 Frog   172 QFYAADCLDAFRMEPKSVKDLTHSTVLDIICTEEYSTGYAAHAKTLSFEIKDRFAIFAGPRLHNM 236

  Fly   247 ------FERSGELQEWVTATDIRITLDRLNTFGDELFGDSQVLKSYFYAISDIAVGARCKCNGHA 305
                  .:.:..|:::.|.||:||.|  |.......|.|.:.|..||||||||.:..|||||.||
 Frog   237 ASLYSQLDTTKNLRDFFTVTDLRIRL--LKPATGATFVDEKNLGRYFYAISDIKIHGRCKCNLHA 299

  Fly   306 SKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKW------------------------- 345
            :.|.     .....|.|:|.|||.|.|||:|...:....|                         
 Frog   300 NSCT-----FTNNRLACDCEHNTTGQDCDKCKKNFQGQAWSPGSYLTIPKGTANICVSSIPSTVQ 359

  Fly   346 ----KRSTST-----------------------------------EVNECKA-CNCNGLADKCFF 370
                |:|.:|                                   :|:..|. |.|:|.:::|.:
 Frog   360 DKKKKQSITTAPPNFDRIKTNSSFLDVANRKQVFSKLALSTVSPAQVSSHKRDCYCHGHSNRCTY 424

  Fly   371 DANLFNRTGHGGHCLDCRENRDGPNCERCKENFY------MRDDGYCVNCACDPVGSRSLQCNSH 429
             ..:.|.    ..|:.||.|..|..||:||:.|:      :.|...|:...||   :..|:|.:.
 Frog   425 -IEVVNT----AVCVSCRHNTRGQQCEKCKKGFHRNGSAKLDDVNVCIANVCD---NELLRCQND 481

  Fly   430 G------KCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTETG 480
            |      :|.|..|.||..|::             |:| .|:|.       ||:.:|
 Frog   482 GVCYNNIRCHCPSGYTGILCEK-------------QKC-ADTGD-------CDSISG 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532 73/249 (29%)
EGF_Lam 298..347 CDD:238012 20/77 (26%)
Laminin_EGF 359..414 CDD:395007 17/60 (28%)
EGF_Lam 414..458 CDD:214543 11/49 (22%)
Laminin_EGF 461..511 CDD:395007 6/20 (30%)
LamB 572..697 CDD:214597
EGF_Lam 743..791 CDD:238012
EGF_Lam 793..836 CDD:214543
Laminin_EGF 847..897 CDD:395007
Laminin_EGF 902..953 CDD:395007
EGF_Lam 956..1001 CDD:214543
Laminin_EGF 1004..1046 CDD:395007
SMC_prok_B <1054..1621 CDD:274008
ntng1XP_031756887.1 Laminin_N 46..291 CDD:459653 73/250 (29%)
EGF_Lam 292..338 CDD:238012 20/50 (40%)
EGF_Lam 413..461 CDD:238012 15/52 (29%)
EGF_CA <478..502 CDD:238011 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.

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