DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB2 and lama2

DIOPT Version :10

Sequence 1:NP_524006.1 Gene:LanB2 / 39118 FlyBaseID:FBgn0267348 Length:1639 Species:Drosophila melanogaster
Sequence 2:XP_073788193.1 Gene:lama2 / 100049705 ZFINID:ZDB-GENE-060119-1 Length:3211 Species:Danio rerio


Alignment Length:2286 Identity:559/2286 - (24%)
Similarity:825/2286 - (36%) Gaps:800/2286 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GRPQKCL-PEFINAAYQLQIESTNTCGEQNDNHFC-----IQTMNQNHKNCEFC------KYNDH 114
            |.||:.| |..:|.|...:|::..||||.....:|     :......:..|..|      .|..|
Zfish    18 GAPQRGLFPAVLNLASMAEIKTNATCGETGPEMYCKLVEHVPGRPVKNPQCRTCDLNSDYDYERH 82

  Fly   115 NPSFLTDLHDPQSPTWWQSETMFEGIQHPNYVNLTLHLGKSYDITYVRI-LFRSPRPESFTIYKR 178
            ...|..|    .:..||||.::..|:. .::|.:||.|.:.:.|.||.: ...||||.:: |.:|
Zfish    83 PIEFAID----GTNRWWQSPSIMNGMD-LHHVTVTLDLQQVFQIAYVILKAANSPRPGNW-ILER 141

  Fly   179 TSESGPWIPYQFYSAT---CRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRDGEIAFSTLEG 240
            :.:...::|:|:|:.|   |...|::...........:...:|||.||.|.||.:|||..|.:.|
Zfish   142 SLDGETFMPWQYYAITDTECITRYNIIPRTGPPSYTHDDEVICTSFYSKIHPLENGEIHTSLING 206

  Fly   241 RPSGINFERSGELQEWVTATDIRITLDRLNTFGDELFG---------DSQVLKSYFYAISDIAVG 296
            |||.  .:.|..|..:.:|..||:...|:.|...:|..         |..|.:.|:|:|.||:||
Zfish   207 RPSA--DDPSPTLLNFTSARFIRLQFQRIRTLNADLMTLALHDPRDIDPIVTRRYYYSIKDISVG 269

  Fly   297 ARCKCNGHASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNECKACNC 361
            ..|.|.|||..|..:|  |.:: ..|||.|||.|..||||.|.||...|...|....:.|:.|||
Zfish   270 GMCICYGHAKACPLNT--HTKK-FSCECEHNTCGESCDRCCPAYNQKPWMAGTFLTRHVCEKCNC 331

  Fly   362 NGLADKCFF-----DANL-FNRTGH---GGHCLDCRENRDGPNCERCKENFYMRDDGY------- 410
            :..:::|::     ||.| .|..|.   ||.||.|.||..|.||:.|.:.|| |..|.       
Zfish   332 HNKSEECYYNQTVADAKLSLNIHGEYEGGGVCLGCSENTGGINCQSCIDGFY-RPSGVSPLEPWP 395

  Fly   411 CVNCACDPVGSRSLQCNSH----------GKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDS 465
            |..|.||..|:....|...          |.|.||||..|:.||||...|..| |. |::|.|.|
Zfish   396 CTPCTCDLRGALHSTCVPDESQATTDLPVGSCICKPGYAGEHCDRCVFGYAGF-PQ-CERCRCSS 458

  Fly   466 GGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPCFCYGHTSECMTAPGYS 530
            .||....| |...   |.|||:||||.|:.||.||::|......||..|:|.|..|.|..:. :.
Zfish   459 DGSINQDP-CQPP---CVCKEHVEGRDCDRCKQGFYHLSGGRVRGCDKCYCSGVASLCAESQ-WD 518

  Fly   531 IVSVTSNFNKFKERW--TAADLN-------QREV--DIKYNQYSRSIGTTAQGNEHVYFQAPDRF 584
            ..:||.     ...|  |.||..       .||.  .:..:|.......||.    .|:.||..:
Zfish   519 YTNVTD-----MSGWYLTGADGEGLVWAEPSRETAHQVTVSQSDAQTHLTAP----YYWSAPSAY 574

  Fly   585 LGDQRASYNRDLKFKL----QLVGQVANTGVSDVILEGAGSRIS---LPIFAQGNGIPDQGVKEY 642
            ||.:..:|...|.:.:    :.:..|......||||||.|.|:.   ..:..:.....::|| :.
Zfish   575 LGKKLLAYGGRLVYSISHDTESLEAVHTLRAPDVILEGGGLRLVHRWSEVLLKSLSSSERGV-DL 638

  Fly   643 TFRLHEHHDYQWQPSQSARGFLSILSNLTAIKIRATYSVQ--GEAI--LDDVELQTAHRGA-AGH 702
            ...|.:|.  ....|.|.|.|.|:|.::..:.:||.:|:|  ..||  |..|.:..|...: :|.
Zfish   639 LPELFQHQ--ASGQSVSRRDFHSVLQHIQRLMLRAEHSLQEHTHAIYRLGSVRMSVADEDSRSGI 701

  Fly   703 PATWIEQCTCPEGYLGQFCESCAPGYRH---SPARGGPFMPCIPCDCHGHADICDSETGRCI-CQ 763
            .|..:|.|.||.||.|..||.||.|||.   :..||    .|..|.||||.:.||..||.|: |:
Zfish   702 QARAVEVCQCPPGYDGTSCEMCALGYRRVNGTIYRG----VCELCQCHGHTERCDDLTGHCLGCR 762

  Fly   764 HNTHGDNCDQCAKGFYGNALGGTPNDCKRCPCP-----ND--GACLQINEDTVICTECPKGYFGS 821
            .:|.|.||.|||.|:||:|..||.:||:.|.||     |:  ..|.......|||..||.||.||
Zfish   763 DHTVGPNCGQCAPGYYGDATRGTADDCQPCACPLLSPANNFSPTCRVDGRGEVICDRCPPGYTGS 827

  Fly   822 RCEQCSDGFFGDPTGLLGEVQTCKSCDCNGNVDPNAVGNCNRTTGECLKCIHNTAGEHCDQCLSG 886
            ||::||:|:||.|....|   :|:.|.|:||:|..|..:|:..||.||:|.....|..|::|..|
Zfish   828 RCDRCSNGYFGRPNIPGG---SCQPCVCSGNLDQTAPLSCDPLTGACLRCREGYGGADCERCADG 889

  Fly   887 HFGDPLALPHGRCDRCSCYEAGTEQDEQSITRCDQVTGQCQCKPNVIGRDCGECQPGYF------ 945
            :|||  ||....|..|.|:..|:..:     .|.|.||||||:.:||||.|.||.|..:      
Zfish   890 YFGD--ALIAKNCQACQCHSNGSVSE-----LCHQETGQCQCRQHVIGRQCDECMPNCWWDGESQ 947

  Fly   946 -------NIR------------------------------------------------------- 948
                   |:|                                                       
Zfish   948 RCRPCECNVRGSVSQRCDSEGRCVCRAGFVGRRCELMRPPHSRRETRRPVQQVPIQHVQRWESRG 1012

  Fly   949 ------------SGN------GCENCLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYG 995
                        :|:      ||..|.|:..||.:..||. ||||.|:|||.||:||:|....:.
Zfish  1013 GCPRGAYRPGTGAGSHLQGALGCVPCHCNSFGSKSFDCDE-SGQCRCQPGVTGQKCDRCAAGHFS 1076

  Fly   996 FS----------------------------------------------SEGCKPCECDESGSKGF 1014
            |.                                              |.|||||.|:..||...
Zfish  1077 FQEGGCTPCQCAHVGNNCDASTGQCICPPNTVGERCDKCAPNHWGHDISTGCKPCGCNALGSVAQ 1141

  Fly  1015 QC--------------------------------------------------------DQNGQCP 1023
            ||                                                        |::|||.
Zfish  1142 QCNLNTGCCMCREQFRGEKCDECKLGYRDFPQCISCQCSAAGSSLDTCDSESGLCACADRSGQCS 1206

  Fly  1024 CNDNVEGRRCDRCKENKYD-RHRGCIDCPDCY-----NLVQDAADLHRAKLFNL-SQT----LDE 1077
            |..||||::|:|||...:. .||..:.|..||     :...:|..|.|.:|..: .||    :|.
Zfish  1207 CKANVEGQKCERCKSGSFGLSHRNPLGCSRCYCFGLSSSCTEATGLIRMRLTLMPEQTVLPLVDR 1271

  Fly  1078 IARTPVTNDDEFE-----AKLKAVQEKVA-------------------------VLAQDARDNSG 1112
            ......|....|:     |....||::::                         .:..:||:.:|
Zfish  1272 SGHQETTAGITFQHPDIIATADVVQQQLSEPYYWRLPKQFKRSMITAYGGKLRYAIYYEAREETG 1336

  Fly  1113 ----------DGGQTYAEV---------IDDLHKHLDSVREH--------LVSADKFQ------- 1143
                      .||....::         |..|.:|...:.||        .:|.:.|.       
Zfish  1337 RTSYEPQVIIKGGPNKDKIMVRHMPALQIGQLTRHEIDITEHEWKHKDDRPMSREDFMDVLFHVE 1401

  Fly  1144 ------ADAN--------------GEIDRARQNYTILDQI------------------------- 1163
                  :..|              .|:.||.|:..|..||                         
Zfish  1402 YILIKASHGNVMRHSRISEITLEVAEVGRASQDSEIAHQIEKCVCPQGYAGLSCEECAAGFYRLS 1466

  Fly  1164 ------------------------------------------------------------TENAK 1168
                                                                        |::.|
Zfish  1467 VLAGGSASRAGFGSCVRCQCNGHSDSCDPETSICQNCQHNTVGDKCERCAAGFYGVVRGFTDDCK 1531

  Fly  1169 KELQQALDLLNDE---------------------------------------------------- 1181
               ..|..|||.|                                                    
Zfish  1532 ---PCACPLLNPENNFSPTCQTEGFNEYRCTACPEGYEGKHCERCAPGFHGDPGVLGGRCEECKC 1593

  Fly  1182 ---GA----------QALARAKEKSVEFGQQSEQ-------------------ISDISREARALA 1214
               ||          |...|.....::..|..|:                   |.|:.|..|.:.
Zfish  1594 DPYGAFPSACDSRSGQCQCRPGASGLKCDQCMERHVCGPEGIVSCDDDCAGLLIRDMERLLRLIG 1658

  Fly  1215 D---------------KLESEAQFDLKNAKDAKDAVEKAHQLAKS-------AIDLQLKIGTEL- 1256
            .               :.|:..: :||:....:.|.|:..|||.|       .:|..|...|:: 
Zfish  1659 SVNLTLPLPLPYKVLYRFENVTE-ELKHMLSPQRAPERLMQLADSNLGSLVTEMDELLNRATKVS 1722

  Fly  1257 --------------RSEVGLELSHVKQSLGTVVQTSKEALR-KANEVYDT----------ALTLL 1296
                          ::...||| :|:.:|     .:.|||| ||.::..|          ::..:
Zfish  1723 ADGEQTAADAERSRKAAEELEL-YVRNTL-----LAAEALRDKARDLNATLGLRDGTLEKSVNEM 1781

  Fly  1297 NDVNRQTQPEIDISQLKKDAVAANER---ADELLKQITELSNSNGELFADFETE--QELTEALLK 1356
            ||..::...|:...||......|:|.   |:.||.::..|.....:..||.:.|  |::::..||
Zfish  1782 NDEIQEMLAELRKRQLTGKKHMADEELGAAEALLSRVKRLFGDPQQATADLKQEVGQKMSDHKLK 1846

  Fly  1357 RAEQQQL-----------EDIELLERAKAAH-----DKATKAVEQ-------GDNTLKEAN---- 1394
            ..|.|:|           ||:.|..:.|..|     |.|.|..||       |:.:|.|||    
Zfish  1847 LQEAQELLEEALTHTRQAEDLTLNNQLKLQHLQGKRDAAVKQKEQTEGVLLEGEKSLDEANALSD 1911

  Fly  1395 ------NTYEKLAG-----------FQSDVQRS-------------------------------- 1410
                  ...|::||           ..||:.|.                                
Zfish  1912 AITRGKEELEEMAGELGPLRDQLRDKVSDLSRGLDESVPELLLRAEDHAAQLNHSAAILDSILAE 1976

  Fly  1411 ----SESAEKALQTVPNIEKEIQNAE----------------------SLISQAEEALDGANKNA 1449
                |.:|..|.....||:..|:.|:                      ||..||:.:|..::...
Zfish  1977 AKNLSFNATAAFSAYTNIKNYIEEADRVAKDAKKTSAEALQLASGPKGSLKDQAKGSLQKSHYLL 2041

  Fly  1450 NEAKK------------NAQEAQLKYAEQASKDAELIRRKANET-------------KVAARNLR 1489
            ||||.            .|.:.:||.|.:.:||   ::::.|:|             |:.|..|:
Zfish  2042 NEAKDLQKDVTENGENLGALQLRLKGANKQNKD---LQKRLNDTVEKLNSIPDDMALKIQATKLK 2103

  Fly  1490 -EEA-----DQLNHRVKLTEMDIF-------KLEESSTKDDNLVDDAKRKVGQAKADTQEAQKQI 1541
             .||     |.|| |:|...:::.       |||:...|.:||:.|.::.:..|.|..::.:.:.
Zfish  2104 AAEANDTALDVLN-RLKDMNLNLMGLKKNYDKLEDDVRKTNNLIKDPEKNIHAAGAKVKDLENEA 2167

  Fly  1542 EKANADLTAIKDELENLKDINTGDLDRLENRLATVEGEINRVNLTGR---IEKYREQRTIQKNLI 1603
            ::....|..|::..:|||. |...:..|.|: |..:....:|:::..   |..||.:  |:|.  
Zfish  2168 DRLMEKLKPIQELQDNLKK-NISQIKELINQ-ARKQANSIKVSVSSGGDCIRTYRPE--IKKG-- 2226

  Fly  1604 DKYDAELRELK 1614
             :|:..:..||
Zfish  2227 -RYNTIILHLK 2236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB2NP_524006.1 LamNT 61..296 CDD:214532 74/258 (29%)
EGF_Lam 298..347 CDD:238012 23/48 (48%)
Laminin_EGF 359..414 CDD:395007 25/70 (36%)
EGF_Lam 414..458 CDD:214543 19/53 (36%)
Laminin_EGF 461..511 CDD:395007 21/49 (43%)
LamB 572..697 CDD:214597 35/135 (26%)
EGF_Lam 743..791 CDD:238012 25/48 (52%)
EGF_Lam 793..836 CDD:214543 22/49 (45%)
Laminin_EGF 847..897 CDD:395007 21/49 (43%)
Laminin_EGF 902..953 CDD:395007 22/136 (16%)
EGF_Lam 956..1001 CDD:214543 21/90 (23%)
Laminin_EGF 1004..1046 CDD:395007 20/98 (20%)
SMC_prok_B <1054..1621 CDD:274008 176/1020 (17%)
lama2XP_073788193.1 None

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