DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3306 and jph1b

DIOPT Version :10

Sequence 1:NP_648335.1 Gene:CG3306 / 39116 FlyBaseID:FBgn0036016 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_001037813.1 Gene:jph1b / 556485 ZFINID:ZDB-GENE-060616-389 Length:673 Species:Danio rerio


Alignment Length:358 Identity:63/358 - (17%)
Similarity:101/358 - (28%) Gaps:161/358 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VDILLTGSRYVGPSDELGMQEMGVYIYPDGTCYTGEFLNNRFHGKGTIQIPDSL----------- 67
            ||...|.| |:|..........||....:|..|.||::||:.||.|....||..           
Zfish   274 VDATTTES-YLGEWKNDKRNGFGVSERSNGMKYEGEWINNKRHGYGCTMFPDGTKEEGKYKNNVL 337

  Fly    68 --GV-------------------------------------TYQVTHHNGRLVSIDQVNFNDSLP 93
              |:                                     |.:..|...:..:.||.:.:.|..
Zfish   338 VRGIKKQLIPLKNTKTKQKVDRAVEGAIRASAIARTKVEIATSRTAHARAKAEAADQASLSASQE 402

  Fly    94 VD-----------------------------FEMKDHYTMSFKPWTYCTPEDRR---------FY 120
            .|                             .|:|:            .||:::         ||
Zfish   403 SDLARAVARDLSPNFHQPGPDYIKQRFSSEPIEIKE------------VPEEKKEKSPSGSPHFY 455

  Fly   121 QE----TKEPMDAVGPNKFQSKDGPNPLNLGRNIFDLGFGLLGNRGFMLDTKTFSNQSIYLGCRE 181
            ::    |:.|..:.||.     ..|:|.                   :...|.|.|:|.....:|
Zfish   456 RKGTTPTQSPSQSPGPT-----PPPSPP-------------------LTKKKPFFNRSAPKAIKE 496

  Fly   182 ARRWIRENCAHGPLSKRHHKQKLLARFAREIIRNNQENAGCSQREFMTKIHPCKHSTSLDSFASE 246
            .:....||.|.| :||           |...|.:.||    ..:|.:....|.|           
Zfish   497 NKPPAAENLAAG-VSK-----------ANTRISDKQE----VNQEVVPVAKPSK----------- 534

  Fly   247 RLHLASTTDSTTSEAQAMGLRHEEFHGNWTRAK 279
              .||...:::   :...|..|.::||.:.:|:
Zfish   535 --PLAPVANAS---SPGNGELHTQYHGYYVKAE 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3306NP_648335.1 COG4642 <20..>79 CDD:443680 19/108 (18%)
jph1bNP_001037813.1 COG4642 <2..143 CDD:443680
PLN03185 38..>342 CDD:215619 20/68 (29%)
Blue background indicates that the domain is not in the aligned region.

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