Protein Alignment CG3306 and Als2

DIOPT Version :10

• Sequence 1: NP_648335.1
• Gene: CG3306 / 39116
• FlyBaseID: FBgn0036016
• Length: 288
• Species: Drosophila melanogaster
• Sequence 2: NP_649347.1
• Gene: Als2 / 40410
• FlyBaseID: FBgn0037116
• Length: 1486
• Species: Drosophila melanogaster
• Alignment Length: 283
• Identity: 57/283 - (20%)
• Similarity: 95/283 - (33%)
• Gaps: 90/283 - (31%)

  Fly    20 GSRYVGPSDELGMQEMGVYIYPDGTCYTGEFLNNRFHGKGTIQIPDSLGV-TYQVTHHNGRLVSI 83
            |.|:.|.    |:.||.....|:...|.|.|....|||.|.::....:.| .||....:|..|..
  Fly   795 GGRFHGH----GVYEMHCKDSPESEVYEGNFCEGLFHGHGVMRNNRYIYVGEYQANARSGYGVIE 855

  Fly    84 DQVNFNDSLPVDFEMK------------DHYTMSFKPWTYCTPED----------RRFYQETKEP 126
            |.|:.:..:.:..:.|            |::..||      :.:|          ..:|.|.:
  Fly   856 DLVSGDKYMGMFADNKRSGIGSCITNRGDYFEGSF------SGDDLTGSGVAVFENDYYYEGE-- 912

  Fly   127 MDAVGPNKFQSKDGPNPLNLGRNIFDL-------GFGLLGNRGF-----MLDTKTFSNQSIYLGC 179
            :..:|||             ||..:.:       |.|.:|...|     ::..|.|...|
  Fly   913 LTLLGPN-------------GRGEYYMPSGDACGGSGAMGTGEFDDTCELIGNKMFGQLS----- 959

  Fly   180 REARRWIRENCAHGPLSKRHHKQKLLARFAREIIRNNQENAGCSQREFMTKIHPCKHSTSLDSFA 244
               ..|.......|.|.......|..:...|:::.:|:                 |..:..::|.
  Fly   960 ---GTWDTVRIQAGELVLNRRFPKYPSSLGRQVVDHNR-----------------KWRSLFNNFE 1004

  Fly   245 SERLHLASTTDSTTSEA--QAMG 265
            |:   ||:.|.||:|..  |:.|
  Fly  1005 SD---LANCTASTSSSGGNQSAG 1024

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3306	NP_648335.1	COG4642	<20..>79	CDD:443680	17/59 (29%)
Als2	NP_649347.1	ATS1	<238..>367	CDD:444065
		PH-like	616..715	CDD:473070
		COG4642	<745..890	CDD:443680	23/98 (23%)
		PLN03185	835..>962	CDD:215619	26/155 (17%)
		VPS9	1373..1479	CDD:460489