DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3306 and Jph2

DIOPT Version :9

Sequence 1:NP_648335.1 Gene:CG3306 / 39116 FlyBaseID:FBgn0036016 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_001033063.1 Gene:Jph2 / 296345 RGDID:1305196 Length:692 Species:Rattus norvegicus


Alignment Length:92 Identity:26/92 - (28%)
Similarity:41/92 - (44%) Gaps:4/92 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TGSRYVGPSDELGMQE-MGVYIYPDGTCYTGEFLNNRFHGKGTIQ-IPDSLGVTYQVTHHNGRLV 81
            :|::|.|..:. |:|: .|...|.||..|.|:|.|...||.|..| :|..:.|..:...... |.
  Rat   102 SGAKYEGTWNN-GLQDGYGTETYADGGTYQGQFTNGMRHGYGVRQSVPYGMAVVVRSPLRTS-LS 164

  Fly    82 SIDQVNFNDSLPVDFEMKDHYTMSFKP 108
            |:...:.|.::..|....|..|:...|
  Rat   165 SLRSEHSNGTVAPDSPAADGPTLPLPP 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3306NP_648335.1 COG4642 <36..90 CDD:226989 16/54 (30%)
Jph2NP_001033063.1 MORN 1. /evidence=ECO:0000255 14..36
MORN 2. /evidence=ECO:0000255 38..59
MORN 3. /evidence=ECO:0000255 60..79
MORN 4. /evidence=ECO:0000255 82..104 0/1 (0%)
MORN 106..128 CDD:280628 8/22 (36%)
MORN 5. /evidence=ECO:0000255 106..128 8/22 (36%)
MORN 6. /evidence=ECO:0000255 129..151 9/21 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..190 5/25 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..273
MORN 7. /evidence=ECO:0000255 285..307
MORN 307..327 CDD:197832
MORN 8. /evidence=ECO:0000255 308..330
Bipartite nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q9ET78 345..359
Vinculin <413..>497 CDD:279395
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 439..661
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q9ET78 488..492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4642
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.