Protein Alignment CG3306 and Pms2

DIOPT Version :10

• Sequence 1: NP_648335.1
• Gene: CG3306 / 39116
• FlyBaseID: FBgn0036016
• Length: 288
• Species: Drosophila melanogaster
• Sequence 2: XP_036020772.1
• Gene: Pms2 / 18861
• MGIID: 104288
• Length: 875
• Species: Mus musculus
• Alignment Length: 315
• Identity: 66/315 - (20%)
• Similarity: 106/315 - (33%)
• Gaps: 99/315 - (31%)

  Fly    21 SRYVGPSDELGMQEMGVYIYPDGTCYTGEFLNNRFHGKGTIQIPDSLGVTYQVTHHNGRLVSIDQ 85
            :.|:|..........|.:.|..|..|.||:.:|:..|:|            ::|..||.:  .:.
Mouse   282 NEYIGEFVNGFRHGQGKFYYASGAMYEGEWASNKKQGRG------------RMTFKNGHV--YEG 332

  Fly    86 VNFNDSLPVDFEMKDHYTMSFKPWTYCTPEDRRFYQETKEPMDAV-GPNKFQSKDGPNPLN-LGR 148
            :..||.:...||.:..|:.|...|:..:...|   |.....:.|| .|...:..||....: ||.
Mouse   333 LFSNDHIAQFFETEMDYSQSLDRWSDASQRSR---QPRGSSVSAVREPETLRKLDGSESRSVLGT 394

  Fly   149 NIFDLGFGLLGNRGFMLDTKTFSNQS-------------------IY-----LGCREAR------ 183
            :| :|...||      ||.....:|.                   ||     |||..:.
Mouse   395 SI-ELDLTLL------LDMYPEESQEEEKKQVEYAVLRNITELRRIYCFYSGLGCDHSLDNTFLM 452

  Fly   184 ------RWIRENCAHGPLSKRHHKQKLLARFAREIIRNNQENAGCSQREFMTKIHPCKHSTSLDS 242
                  |:::: |      :.||....||...|.:...|    |....|    ||....:..|.:
Mouse   453 TKLHFWRFLKD-C------RFHHHNITLADMDRVLSVYN----GIPIEE----IHSPFRTILLRT 502

  Fly   243 FASERLHLASTTDSTTSEAQAMGLRHEEFHGN-------WTRAKSES---SVCRI 287
            |.:..|.|            |..:.|:||...       :|:..||:   ..|::
Mouse   503 FLNYLLQL------------AYYIHHKEFQNRSPSLFLCFTKLMSENIHPHACQV 545

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3306	NP_648335.1	COG4642	<20..>79	CDD:443680	13/57 (23%)
Pms2	XP_036020772.1	COG4642	<86..336	CDD:443680	14/67 (21%)
		vATP-synt_E	782..>829	CDD:419987