DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3088 and ctrb.2

DIOPT Version :9

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001038747.1 Gene:ctrb.2 / 692313 ZFINID:ZDB-GENE-060519-7 Length:263 Species:Danio rerio


Alignment Length:234 Identity:67/234 - (28%)
Similarity:115/234 - (49%) Gaps:25/234 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITNGSPAYEGQAPYVVGMAFGQSNIWCSGTIIGDTWILTSAQCLTGSSGVTIYFGATRLSQAQF- 92
            |.||..|.....|:.|.:.......:|.|::|.:.|::|:|.|...:|...|.....|.|.|:. 
Zfish    34 IVNGEEAVPHSWPWQVSLQDSTGFHFCGGSLINEWWVVTAAHCNVRTSHRVILGEHDRSSNAESI 98

  Fly    93 -TVTVG------TSEYVTGNQHLALVRVPR-VGFSNRVNRVALPSLRNRSQRYENWWANV-C--- 145
             |:|||      .....|.|..:.|:::.. ...:..|:.|.|      ::..:|:...: |   
Zfish    99 QTMTVGKVFKHPNFNMFTINNDILLIKLATPAKINTHVSPVCL------AETNDNFPGGMKCVTS 157

  Fly   146 GWGVTTFSNGLTDA-LQCVDLQIMSNNECIAFYGSTTVSDQILCTRTPSGRSTCFGDAGSPLITK 209
            |||:|..:...|.| ||...|.:::|.:|..|:|: .::|.::|... ||.|:|.||:|.||:.:
Zfish   158 GWGLTKHNAPDTPALLQQAALPLLTNEDCKRFWGN-KITDLMVCAGA-SGASSCMGDSGGPLVCQ 220

  Fly   210 QDS--TVVGISAFVASNGCTLGLPAGFARITSALDWIHQ 246
            :|.  |:|||.:: .|:.|:...|..:||:|....|:.|
Zfish   221 KDGVWTLVGIVSW-GSSVCSPSSPGVYARVTKLRAWVDQ 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..246 CDD:238113 66/232 (28%)
Tryp_SPc 29..244 CDD:214473 65/230 (28%)
ctrb.2NP_001038747.1 Tryp_SPc 33..256 CDD:214473 65/230 (28%)
Tryp_SPc 34..259 CDD:238113 67/234 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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