DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3088 and CG17239

DIOPT Version :10

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_722784.1 Gene:CG17239 / 59224 FlyBaseID:FBgn0042186 Length:248 Species:Drosophila melanogaster


Alignment Length:226 Identity:50/226 - (22%)
Similarity:78/226 - (34%) Gaps:73/226 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 CSGTIIGDTWILTSAQCLTGSSGVTIYFGATRLSQAQF-TVTVGTSEYVTGNQHLALVRVPRVGF 118
            |...|..:..::|:|.|||.             .:.:| :|.||:|....|.|.:          
  Fly    49 CGAAIYSEDIVITAAHCLTD-------------RETEFLSVRVGSSFTFFGGQVV---------- 90

  Fly   119 SNRVNRVALPSLRNRSQRYENWWAN----------------------------------VCGWGV 149
              ||:.|.|      .:.|:..|:|                                  |.|||.
  Fly    91 --RVSSVLL------HEEYDQSWSNDIAVMRLQSKLRLGSAVSVIPLADTPPASGSPATVSGWGA 147

  Fly   150 TTFSNGLTDALQCVDLQIMSNNECIAFYGSTTVSDQILCTRTPSGRSTCFGDAGSPLITKQDSTV 214
            ..|......::....:.|:..::|...||.....|.| |...| |:..|.||:|.||::  .:.:
  Fly   148 IGFKKNYPMSILSASVDIVDQDQCRRSYGRKITKDMI-CAAAP-GKDACSGDSGGPLVS--GNKL 208

  Fly   215 VGISAFVASNGCT-LGLPAGFARITSALDWI 244
            |||.:|  ...|. ...|..:|.:.....||
  Fly   209 VGIVSF--GKECAHPEYPGVYANVAELKPWI 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 48/224 (21%)
CG17239NP_722784.1 Tryp_SPc 24..237 CDD:238113 48/224 (21%)

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