DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3088 and CG11842

DIOPT Version :9

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster


Alignment Length:265 Identity:70/265 - (26%)
Similarity:106/265 - (40%) Gaps:66/265 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IITNGSPAYEGQAPYVVGMAF----GQSNIWCSGTIIGDTWILTSAQCLTGSSG-VTIYFGATRL 87
            :|..|.||...:.|:...:..    |:...:|.||:|.|..:||:|.|.....| |.|    .||
  Fly    72 LIIGGGPAVPKEFPHAARLGHKDENGEVEWFCGGTLISDRHVLTAAHCHYSPQGSVNI----ARL 132

  Fly    88 SQAQFTVTVGTSE----------------YVTGNQHLALVRVPR-VGFSNRVNRVALPSLRNRSQ 135
            ...:|......::                |......:::||:.| |.|::..:...||       
  Fly   133 GDLEFDTNNDDADPEDFDVKDFTAHPEFSYPAIYNDISVVRLSRPVTFNDYKHPACLP------- 190

  Fly   136 RYENWWAN----VCGWG----VTTFSNGLTDALQCVDL-------QIMS--NNECIAFYGSTTVS 183
             :::....    ..|||    |....|   ..||.|.|       :|.:  |:|....|.:||. 
  Fly   191 -FDDGRLGTSFIAIGWGQLEIVPRTEN---KKLQKVKLYNYGTRCRITADRNDELPEGYNATTQ- 250

  Fly   184 DQILCTRTPSGRSTCFGDAGSP-LITKQDST----VVGISAF-VASNGCTLGLPAGFARITSALD 242
               ||..:...:.||.||:|.| ||...|..    |:||::. ||.:  |..|||.:.|:...||
  Fly   251 ---LCIGSNEHKDTCNGDSGGPVLIYHMDYPCMYHVMGITSIGVACD--TPDLPAMYTRVHFYLD 310

  Fly   243 WIHQR 247
            ||.|:
  Fly   311 WIKQQ 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..246 CDD:238113 69/261 (26%)
Tryp_SPc 29..244 CDD:214473 67/259 (26%)
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 69/262 (26%)
Tryp_SPc 73..312 CDD:214473 67/259 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437140
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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