DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3088 and CG18179

DIOPT Version :10

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_648340.1 Gene:CG18179 / 39124 FlyBaseID:FBgn0036023 Length:268 Species:Drosophila melanogaster


Alignment Length:275 Identity:107/275 - (38%)
Similarity:152/275 - (55%) Gaps:30/275 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLLVVFLGLTL-VAAGSAKKD----------SEDPDHIITNGSPAYEGQAPYVVGMAF----GQ 50
            |||.::.|.:.| |.|.|...:          ||..:..|.||.||.||:|||:||:..    ..
  Fly     1 MKLFLLTLSVALAVVAASPGFNRTSLLPQVTISEGAEGRIVNGYPAPEGKAPYIVGLLIRTDGSN 65

  Fly    51 SNIWCSGTIIGDTWILTSAQCLTGSSGVTIYFGATRLSQAQFTVTVGTSEYVT-------GNQHL 108
            |....:||||...||||:|.||| :..|.|::|:.......|..:|....:::       |.:.:
  Fly    66 SAAVGAGTIIASDWILTAAHCLT-TDYVEIHYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDI 129

  Fly   109 ALVRVPRVGFSNRVNRVALPSLRNRSQRYENWWANVCGWGVTTFSNG-LTDALQCVDLQIMSNNE 172
            .|:|.|.|||::.:|:|||||....|.|:.:.|...||||  ...|| |.|.|||:|:||:||:|
  Fly   130 GLIRTPSVGFTDLINKVALPSFSEESDRFVDTWCVACGWG--GMDNGNLADWLQCMDVQIISNSE 192

  Fly   173 CIAFYGSTTVSDQILCTRTPSGRSTCFGDAGSPLITKQDSTVVGISAFVASNGCTLGLPAGFARI 237
            |...||  ||:...:|||...|:|:|.||:|.||:|..::.:||:..| .|..|..| |:|:.|:
  Fly   193 CEQSYG--TVASTDMCTRRTDGKSSCGGDSGGPLVTHDNARLVGVITF-GSVDCHSG-PSGYTRV 253

  Fly   238 TSALDWIHQRTGIAY 252
            |..|.||...|||:|
  Fly   254 TDYLGWIRDNTGISY 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 91/226 (40%)
CG18179NP_648340.1 Tryp_SPc 40..263 CDD:238113 93/229 (41%)

Return to query results.
Submit another query.