DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3088 and CG12133

DIOPT Version :10

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_610540.2 Gene:CG12133 / 36036 FlyBaseID:FBgn0033469 Length:340 Species:Drosophila melanogaster


Alignment Length:288 Identity:66/288 - (22%)
Similarity:120/288 - (41%) Gaps:61/288 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VAAGSAKKDS-----EDPDHIITNGSPAYEGQAPYVVGMAF------GQSNIWCSGTIIGDTWIL 66
            :.||....||     ..|...|..|..|...|.|:.|.:.:      .:.:..|:|::|...::|
  Fly    41 MVAGDKLPDSRVCGQSPPSSYIVGGMEAQSNQFPWTVLLGYEAYTAKQRPSPMCAGSLIASRYVL 105

  Fly    67 TSAQCLTGSSGVTIYFGATRLSQ------AQFT-------------------VTVGTSEYVTGN- 105
            |:|.||..:.   .|....||.:      ..:|                   :.|...:|.|.| 
  Fly   106 TAAHCLNVND---FYVARVRLGEHDTENDPDYTWLPNGAKIWAPAHVDIDVDLRVPHEQYYTRNG 167

  Fly   106 QH---LALVRV-PRVGFSNRVNRVAL-PSLRNRSQRYENWWANVCGWGVTTFSNGL---TDALQC 162
            :|   :||:|: .||.::.::..:.: |.:...:..::|:...:.|||    .:||   :..|:.
  Fly   168 RHYNDIALLRLKSRVKYTLQIRPICIWPGIELSTSSFKNFPFQIAGWG----DSGLQQKSTVLRQ 228

  Fly   163 VDLQIMSNNECIAFYGSTTVSDQI-LCTRTPSGRSTCFGDAGSPLITK------QDSTVVGISAF 220
            ..:..||.:||:..|.:..|...| :|.....|..|..||:||||:..      |...:.||:::
  Fly   229 GTISGMSPDECLNRYPTLLVDKDIQICAMGWDGTDTGLGDSGSPLMASVGRGADQFYYLAGITSY 293

  Fly   221 VASNGCTLGL-PAGFARITSALDWIHQR 247
             .....:.|. ||.:.:.:|..:||.::
  Fly   294 -GGGPSSYGYGPAVYTKTSSYYEWIKKK 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 59/262 (23%)
CG12133NP_610540.2 Tryp_SPc 62..317 CDD:214473 59/262 (23%)

Return to query results.
Submit another query.