DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3088 and CG30371

DIOPT Version :10

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_610370.1 Gene:CG30371 / 35806 FlyBaseID:FBgn0050371 Length:399 Species:Drosophila melanogaster


Alignment Length:245 Identity:62/245 - (25%)
Similarity:109/245 - (44%) Gaps:27/245 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITNGSPAYEGQAPYVVGMAFGQSN--IWCSGTIIGDTWILTSAQCL---TGSSGVTIYFGATRLS 88
            |.||..|...:.|.:..:.....|  .:|.|||:...:|||:|.|:   :.::.:....|...|.
  Fly   150 IANGQQAAANEFPSMAALKDVTKNQASFCGGTIVAHRYILTAAHCIYQVSRATNIVAIVGTNDLG 214

  Fly    89 Q-------AQFTV--TVGTSEYVT----GNQHLALVRVPRVGFSNRVNRVALPSLRNRSQRYENW 140
            .       .|:.:  .:...:||:    .|....|:....:.:|..|..:.||.: ..|..:...
  Fly   215 NPSSSRYYQQYNIQQMIPHEQYVSDPDVNNDIAVLITASNIQWSRGVGPICLPPV-GTSTPFTYD 278

  Fly   141 WANVCGWGVTTFSNGLTDALQCVDLQIMSNNECIAFYGS-TTVSDQILCT--RTPSGRSTCFGDA 202
            ..:|.|:|...|:...:.:||.::|.:::|.:|...|.: .|:....:||  .:.:||.:|..|:
  Fly   279 LVDVIGYGTVFFAGPTSTSLQKINLNVVTNQDCQTEYNNVATIYTGQMCTYDYSGTGRDSCQFDS 343

  Fly   203 GSPLI-TKQDSTVVGISAFVASNGCTLG-LPAGF-ARITSALDWIHQRTG 249
            |.|:| .|....:|||.::  ...|... .|.|. .||||.:.||.|:.|
  Fly   344 GGPVILRKSRQFLVGIISY--GKSCAESQYPMGVNTRITSYISWIRQKIG 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 58/238 (24%)
CG30371NP_610370.1 CUB 24..>67 CDD:412131
Tryp_SPc 149..386 CDD:214473 58/238 (24%)
Blue background indicates that the domain is not in the aligned region.

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