Protein Alignment CG3088 and psh

DIOPT Version :10

• Sequence 1: NP_648334.1
• Gene: CG3088 / 39115
• FlyBaseID: FBgn0036015
• Length: 252
• Species: Drosophila melanogaster
• Sequence 2: NP_573297.1
• Gene: psh / 32832
• FlyBaseID: FBgn0030926
• Length: 394
• Species: Drosophila melanogaster
• Alignment Length: 258
• Identity: 62/258 - (24%)
• Similarity: 110/258 - (42%)
• Gaps: 43/258 - (16%)

  Fly    27 HIITNGSPAYEGQAPYVVG---MAFGQSNIWCSGTIIGDTWILTSAQCLTGSSGVTIY--FGATR 86
            ||: .|.|...|..|::..   :.|| ::..|.|::|...::||:|.|:...:....:  .||..
  Fly   143 HIV-GGYPVDPGVYPHMAAIGYITFG-TDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVN 205

  Fly    87 LSQAQFTV------TVGTSEYVTGNQH--LALVRVPR-VGFSNRVNRVALPSLRNRSQRYENWWA 142
            :.....:.      :|.......||::  :|::.:.| |..::.:....|.:  :.:....|...
  Fly   206 IENPDHSYQDIVIRSVKIHPQYVGNKYNDIAILELERDVVETDNIRPACLHT--DATDPPSNSKF 268

  Fly   143 NVCGWGV-TTFSNGLTDALQCVDLQIMSNNECIAFY----GSTT-----VSDQILCTRTPS-GRS 196
            .|.|||| ...:...:..|....|:::..::|...|    ||..     |.|.:||..... ...
  Fly   269 FVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIAD 333

  Fly   197 TCFGDAGSPLITK---QDS--TVVGI--SAFVASNGCTLGLPAGFARITSALDWIHQRTGIAY 252
            .|.||:|.|||.:   :|.  |::|:  |.|    ||....|..:.|::|.||:|.   ||.:
  Fly   334 ACKGDSGGPLIHELNVEDGMYTIMGVISSGF----GCATVTPGLYTRVSSYLDFIE---GIVW 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3088	NP_648334.1	Tryp_SPc	29..244	CDD:214473	57/246 (23%)
psh	NP_573297.1	CLIP	30..79	CDD:197829
		Tryp_SPc	144..387	CDD:238113	59/253 (23%)