DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3088 and CG18420

DIOPT Version :9

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:285 Identity:63/285 - (22%)
Similarity:111/285 - (38%) Gaps:73/285 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLVVF--LGLTLVAAGSAKKDSE----DPDHI---ITNGSPAYEGQAPYVVGMAFGQSNIWCSGT 58
            ||.||  ||.|...      |||    .|..:   |.||..|....:|::..:....:...|.||
  Fly    14 LLTVFPLLGSTQFL------DSECGTRSPLKLGPRIVNGKVAVRNSSPWMAFLHTSSNQFICGGT 72

  Fly    59 IIGDTWILTSAQCLTGSSGVTIYFG--------------ATRLSQAQFTVTVGTSEYVTGNQH-- 107
            :|....:||:|.|...::.:.:..|              ..|..|.:|         ...|.|  
  Fly    73 LISRRLVLTAAHCFIPNTTIVVRLGEYNRKLKGYREEHQVNRTFQHRF---------YDPNTHAN 128

  Fly   108 -LALVRVPRVGFSNRVNRVALPSLRNRSQRYENWWAN---------VCGWGVTTFSNGLTDALQC 162
             :||:|:    .||.|.:.   ::|.....::..|.:         ..|||.|...:..:: |:.
  Fly   129 DIALLRL----VSNVVYKA---NIRPICIMWDASWKHHIDSIKVLTGTGWGRTESMHDSSE-LRT 185

  Fly   163 VDLQIMSNNECIAFYGSTTVSDQILCTRTPSGRSTCFGDAGSP---LITKQDS---TVVGISAFV 221
            :|:....:..|.  :|| .:|:|.......|  :.|.||.|.|   ::..:::   ..|||:  :
  Fly   186 LDISRQPSKMCA--FGS-VLSNQFCAGNWNS--NLCIGDTGGPVGAMVRYRNAFRFVQVGIA--I 243

  Fly   222 ASNGCTLGLPAGFARITSALDWIHQ 246
            .:..|.  .|:.|..:.|.:::|.:
  Fly   244 TNKRCQ--RPSVFTDVMSHIEFIRR 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..246 CDD:238113 52/248 (21%)
Tryp_SPc 29..244 CDD:214473 51/246 (21%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 51/247 (21%)
Tryp_SPc 43..267 CDD:238113 52/250 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436101
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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