DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3088 and Sp212

DIOPT Version :10

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_996209.2 Gene:Sp212 / 2768666 FlyBaseID:FBgn0053329 Length:516 Species:Drosophila melanogaster


Alignment Length:276 Identity:54/276 - (19%)
Similarity:108/276 - (39%) Gaps:63/276 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LTLVAAGSAKKDSEDPDHIITNGSPAYEGQAPY--------VVGMAFGQSNIWCSGTIIGDTWIL 66
            ::.|..|  ::.|..|  .|..|:....||.|:        |..:||.     |.|::|..:.::
  Fly   262 ISSVVCG--REGSTTP--FIVRGNEFPRGQYPWLSAVYHKEVRALAFK-----CRGSLISSSIVI 317

  Fly    67 TSAQCLTGSSGVTIYFGATRLSQAQFTVTVGT----------------------SEYVT---GNQ 106
            ::|.|:            .|:::.:..|.:|.                      .:|.|   .:.
  Fly   318 SAAHCV------------HRMTEDRVVVGLGRYDLDDYGEDGAEMRNVMRLLWHPDYNTRSYSDA 370

  Fly   107 HLALVRVPR-VGFSNRVNRVALPSLRNRSQRYENWWANVCGWGVTTFSNGLTDALQCVDLQIMSN 170
            .:||:.:.| |.|::.:..:.:.::  .:.|..:....:.|||....|: .|...:.|:.:|.|.
  Fly   371 DIALITIERPVTFNDIIAPICMWTV--EASRTVSTTGFIAGWGRDEDSS-RTQYPRVVEAEIASP 432

  Fly   171 NECIAFYGSTTVSDQILCTRTPSGRSTCFGDAGSPLITKQDST-----VVGISAFVASNGCTLGL 230
            ..|.:.:..|.|:::.||.....|...|.||:|..|:.||...     :|.......:..|.|..
  Fly   433 TVCASTWRGTMVTERSLCAGNRDGSGPCVGDSGGGLMVKQGDRWLLRGIVSAGERGPAGTCQLNQ 497

  Fly   231 PAGFARITSALDWIHQ 246
            ...:..::..::||.:
  Fly   498 YVLYCDLSKHINWISE 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 48/253 (19%)
Sp212NP_996209.2 GD_N 23..127 CDD:464985
Tryp_SPc 277..514 CDD:238113 50/257 (19%)
Blue background indicates that the domain is not in the aligned region.

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