DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3088 and CG30088

DIOPT Version :10

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:241 Identity:61/241 - (25%)
Similarity:100/241 - (41%) Gaps:38/241 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITNGSPAYEGQAPYVVGMAFGQSNIWCSGTIIGDTWILTSAQCL-------TGSSGVT----IYF 82
            |..|..|....||::..:.: .|.|.|.||||...:|||:|.|:       .|...:|    ...
  Fly    45 IVRGKEAMLKSAPFMAYLYY-SSEIHCGGTIISSRYILTAAHCMRPYLKVRLGEHDITRNPDCQG 108

  Fly    83 GATRLSQAQFTVTVGTSEYVTGNQHL----ALVRVPR-VGFSNRVNRVAL---PSLRNRSQRYEN 139
            |:......:|.:.:.| :|...::.|    ||:::.| :.|:..:..:.|   |:.......::.
  Fly   109 GSCSPPAEEFDIVLAT-KYKRFDRFLANDIALLKLSRNIRFNVHIQPICLILNPAAAPNVHEFQA 172

  Fly   140 WWANVCGWGVTTFSNGLTDALQCVDLQIMSNNECIAFYGSTTVSDQILCTRTPSGRSTCFGDAGS 204
            :     |||.|. :|...:.||...|....|..|.:........:| ||... .|..||.||:|.
  Fly   173 F-----GWGQTE-TNHSANVLQTTVLTRYDNRHCRSVLSMPITINQ-LCVGF-QGSDTCSGDSGG 229

  Fly   205 PLITKQDSTVV------GISAFVASNGCTLGLPAGFARITSALDWI 244
            ||:||.:...|      ||.:| ..:.|.  .|..:..:.:.:.||
  Fly   230 PLVTKVNYDGVWRYLQLGIVSF-GDDKCQ--SPGVYTYVPNYIRWI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 59/239 (25%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 61/241 (25%)

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