DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3088 and CG43742

DIOPT Version :10

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:NP_001261130.1 Gene:CG43742 / 14462622 FlyBaseID:FBgn0263999 Length:474 Species:Drosophila melanogaster


Alignment Length:234 Identity:54/234 - (23%)
Similarity:97/234 - (41%) Gaps:33/234 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITNGSPAYEGQAPYVVGMAFGQSNIWCSGTIIGDTWILTSAQCLTGSSGVTIYFGATRLS----Q 89
            :.||..|...|   .:...:..|..:|.|::|...::||:|.|:.....||::.|....|    .
  Fly    35 VANGHTAITSQ---FMAALYNNSEFFCGGSLIHKQYVLTAAHCVRDLDEVTVHLGENNRSCPIPV 96

  Fly    90 AQFTVTVGTSEYVTGNQH-------LALVRVPR-VGFSNRVNRVALPSLRNRSQRYENWWANVCG 146
            .:..:.:.....:..|.|       :||:|:.| |.|...:..:.:....:.:...:|.: ...|
  Fly    97 CKHVLRLNAKVILHPNFHGNIFLNDIALLRLEREVIFEAHIRPICIILDEDVTSNNQNNF-TAYG 160

  Fly   147 WGVTTFSNGLTDALQCVDLQIMSNNECIAFYGSTTVSDQILCTRTPSGRSTCFGDAGSPLI---- 207
            ||.|...| ::|.|..:||..:..:.|  :....|:     |..:.|| .||..|:|.|||    
  Fly   161 WGKTEHGN-ISDVLSFIDLVRLPKSMC--YQNINTI-----CAGSTSG-DTCESDSGGPLIGNFV 216

  Fly   208 --TKQDSTVVGISAFVASNGCTLGLPAGFARITSALDWI 244
              .|....:.||::: ....|: ||...:..:.:...||
  Fly   217 HRGKSRDILFGITSY-GDAECS-GLFGVYTDVNAYKSWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 52/232 (22%)
CG43742NP_001261130.1 Tryp_SPc 34..253 CDD:214473 52/232 (22%)
Tryp_SPc 273..467 CDD:473915
Blue background indicates that the domain is not in the aligned region.

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