DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3088 and si:dkey-21e2.14

DIOPT Version :10

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_068075470.2 Gene:si:dkey-21e2.14 / 100034620 ZFINID:ZDB-GENE-050208-699 Length:251 Species:Danio rerio


Alignment Length:263 Identity:66/263 - (25%)
Similarity:113/263 - (42%) Gaps:30/263 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLVVFLGLTLVAAGSAKKDSEDPDHIIT------NGSPAYEGQAPYVVGMAFGQSNIWCSGTIIG 61
            :.::.:.|.|:.       |..||...|      :|:.|.....||:|.:.....|. |.|::|.
Zfish     1 MTIIIISLLLLV-------SLVPDLTFTARVGIEDGTEAKPHSRPYMVSLQKNSKNS-CGGSLIT 57

  Fly    62 DTWILTSAQCLTGSSGVTIYFGATRLSQAQFTVTVGTSEYVT---------GNQHLALVRVPRVG 117
            :.::||:|.|......:|:..||..||:.:...:...:.|:.         .|..:.|....:|.
Zfish    58 EEFVLTAAHCWKKGDVITVVVGAHDLSENETYDSFEVTSYIPHPEFSWQNYENDIMLLKLNKKVT 122

  Fly   118 FSNRVNRVALPSLRNRSQRYENWWANVCGWGVTTFSNGLTDALQCVDLQIMSNNECIAFYGSTTV 182
            .|:.|..::||  :|.....|:...:|.|||....:....|.|...:..|:|..||...:.|...
Zfish   123 LSDNVGLISLP--KNGEDVKEDAVCSVAGWGRLWLNGPRPDRLMEAETVIVSGEECKRRWESLFK 185

  Fly   183 SDQILCTRTPSGRSTCFGDAGSPLITKQDSTVVGISAFVASNGCTLG-LPAGFARITSALDWIHQ 246
            ..::.|.....|  ||.||:|.||:....:  ||:::|.....|... ||..:.:|::.|.||.:
Zfish   186 PSKMFCVYGHGG--TCKGDSGGPLVCGDHA--VGVTSFSDRYSCNSRLLPNMYTKISAYLSWIQK 246

  Fly   247 RTG 249
            .||
Zfish   247 ITG 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..244 CDD:214473 57/230 (25%)
si:dkey-21e2.14XP_068075470.2 None

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