DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3088 and LOC100004427

DIOPT Version :9

Sequence 1:NP_648334.1 Gene:CG3088 / 39115 FlyBaseID:FBgn0036015 Length:252 Species:Drosophila melanogaster
Sequence 2:XP_005163955.1 Gene:LOC100004427 / 100004427 -ID:- Length:302 Species:Danio rerio


Alignment Length:242 Identity:76/242 - (31%)
Similarity:120/242 - (49%) Gaps:40/242 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ITNGSPAYEGQAPYVVGMAF---GQSNIWCSGTIIGDTWILTSAQCL--TGSSGVTIYFGATRLS 88
            |..|..|.||..|:...:.|   ||  .:|||::|.:.|:||:|.|.  ...|.|.||.|  ||:
Zfish    36 IVGGLNATEGSWPWQASINFKSTGQ--FFCSGSLISERWVLTAASCFQRINVSDVVIYLG--RLT 96

  Fly    89 QAQFTVTVGTSEY--------VTGNQHLALVRV-PRVGFSNRVNRVALPSLRN-RSQRYENWWAN 143
                  |.|::.|        |:..:.:|||:: ..|.|::.:..|.|.:..: .....|:|   
Zfish    97 ------TNGSNPYEIPRTVIQVSVTEDIALVQLSSSVTFTDYIRPVCLAAAGSVFVDGTESW--- 152

  Fly   144 VCGWGVTTFSNG-LTDALQCVDLQIMSNNECIAFYGSTTVSDQILCTR--TPSGRSTCFGDAGSP 205
            |.|||.|:.:|. |:|.|:.|:..|::|.||....|.|.: |.::|..  ..:|::.|:.|.|||
Zfish   153 VTGWGSTSSTNVILSDMLKEVEAPIVNNIECSNINGITNL-DNVICAGFVNETGKAPCWEDFGSP 216

  Fly   206 LITKQDS----TVVGISAFVASNGCTLGLPAGFARITSALDWIHQRT 248
            |:|:|.|    :.|.:..|...|    |.|..:||::...:||...|
Zfish   217 LVTRQGSQWIQSGVVVFTFCGQN----GFPTLYARVSEYEEWIRNYT 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3088NP_648334.1 Tryp_SPc 29..246 CDD:238113 75/238 (32%)
Tryp_SPc 29..244 CDD:214473 73/236 (31%)
LOC100004427XP_005163955.1 Tryp_SPc 35..255 CDD:214473 73/236 (31%)
Tryp_SPc 36..257 CDD:238113 75/238 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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