DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS9 and Imp3

DIOPT Version :9

Sequence 1:NP_001287008.1 Gene:RpS9 / 39108 FlyBaseID:FBgn0010408 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001101622.1 Gene:Imp3 / 315697 RGDID:1306825 Length:184 Species:Rattus norvegicus


Alignment Length:167 Identity:48/167 - (28%)
Similarity:79/167 - (47%) Gaps:17/167 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVLDESRM 93
            ||:::..|||:.:.|..|.......:|:.||.|..|.|:|..|:....|||.:|..:|:: .:|.
  Rat    30 ELRVLRRYGLQRREEYTRYNQLSRAVRELARRLRDLPERDPFRVRASAALLDKLYALGLV-PTRG 93

  Fly    94 KLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHI 158
            .|:....:....|..|||.|.:.||.:|:.:..|...:.|.|:||...||..|:|:|....:..:
  Rat    94 SLELCDSVSASSFCRRRLPTLLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFV 158

  Fly   159 DFSLKSPFGGGRPGRVKRKNLKKNQGGGGGAAEEEED 195
            .:...|        ::||..|:.|        ||.:|
  Rat   159 TWVDSS--------KIKRHVLEYN--------EERDD 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS9NP_001287008.1 PTZ00155 4..182 CDD:185484 44/152 (29%)
Imp3NP_001101622.1 RpsD 1..>168 CDD:223596 41/146 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0522
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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