DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3408 and PIRL4

DIOPT Version :9

Sequence 1:NP_648328.1 Gene:CG3408 / 39107 FlyBaseID:FBgn0036008 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_195272.1 Gene:PIRL4 / 829699 AraportID:AT4G35470 Length:549 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3408NP_648328.1 LRR_RI <43..>124 CDD:238064
leucine-rich repeat 44..66 CDD:275378
LRR_8 65..123 CDD:290566
leucine-rich repeat 67..89 CDD:275378
leucine-rich repeat 90..112 CDD:275378
leucine-rich repeat 113..124 CDD:275378
PIRL4NP_195272.1 LRR 194..>471 CDD:227223
leucine-rich repeat 271..293 CDD:275380
leucine-rich repeat 294..316 CDD:275380
leucine-rich repeat 317..339 CDD:275380
leucine-rich repeat 340..362 CDD:275380
leucine-rich repeat 363..385 CDD:275380
leucine-rich repeat 386..408 CDD:275380
leucine-rich repeat 409..431 CDD:275380
leucine-rich repeat 432..456 CDD:275380
leucine-rich repeat 457..479 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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