DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3408 and lrrc18b

DIOPT Version :9

Sequence 1:NP_648328.1 Gene:CG3408 / 39107 FlyBaseID:FBgn0036008 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_697419.3 Gene:lrrc18b / 568967 ZFINID:ZDB-GENE-110315-1 Length:255 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3408NP_648328.1 LRR_RI <43..>124 CDD:238064
leucine-rich repeat 44..66 CDD:275378
LRR_8 65..123 CDD:290566
leucine-rich repeat 67..89 CDD:275378
leucine-rich repeat 90..112 CDD:275378
leucine-rich repeat 113..124 CDD:275378
lrrc18bXP_697419.3 LRR_8 33..88 CDD:290566
leucine-rich repeat 33..54 CDD:275380
leucine-rich repeat 55..77 CDD:275380
leucine-rich repeat 78..125 CDD:275380
leucine-rich repeat 102..122 CDD:275380
LRR_8 124..182 CDD:290566
leucine-rich repeat 126..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
DUF4939 159..>213 CDD:292913
leucine-rich repeat 172..195 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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