DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3408 and lrrc59

DIOPT Version :10

Sequence 1:NP_648328.1 Gene:CG3408 / 39107 FlyBaseID:FBgn0036008 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001001205.1 Gene:lrrc59 / 407863 XenbaseID:XB-GENE-963187 Length:308 Species:Xenopus tropicalis


Alignment Length:237 Identity:85/237 - (35%)
Similarity:127/237 - (53%) Gaps:46/237 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NVKERVVDETCDLSLSELSEIPVREIASFKRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQI 77
            |:::::.....|||||:|||:|||::.:..:.|.||||.|:|.:|..:|..|:.:||||||||||
 Frog    10 NLRDKLDGNELDLSLSDLSEVPVRDLVAIPKATALDLSCNKLTSLPDDFCNLSYIVRLDLSKNQI 74

  Fly    78 KFLPEDFGQLEQLRHLDLYNNCLEHLPISFGQLRRLRYLDLKGNPLTPAWEKIVGCCSTQKDCQQ 142
            ..||.:||:|..|:||||..|.:..||:||.||:.|::||||.|||.||..|:.|.|..:|.|::
 Frog    75 AQLPSEFGRLVNLQHLDLLQNRIVALPVSFAQLKSLKWLDLKDNPLKPALAKVAGDCLDEKQCKE 139

  Fly   143 AAKNTV----SICANYKPEF--------IERERLAAQE--------------SQKMAGAGDSSAN 181
            .|:..:    |:.::::.|.        ..::||.||:              .|:.........|
 Frog   140 CAQGVLQYMKSVQSDHERELQRKLQLDKDRKQRLEAQQRVKEEQDRELRKRMKQQQKERKRRDYN 204

  Fly   182 AVQTNGGAAGGKKSTKPNNKKA--------------KAKKLA 209
            |:|.      .:|:...|.|||              |.||||
 Frog   205 AMQE------AQKALNNNKKKAEEEPSENHKPVPTPKEKKLA 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3408NP_648328.1 LRR <21..>124 CDD:443914 55/102 (54%)
leucine-rich repeat 44..66 CDD:275378 10/21 (48%)
leucine-rich repeat 67..89 CDD:275378 15/21 (71%)
leucine-rich repeat 90..112 CDD:275378 12/21 (57%)
leucine-rich repeat 113..124 CDD:275378 7/10 (70%)
lrrc59NP_001001205.1 LRR 1 10..31 9/20 (45%)
LRR <19..>126 CDD:443914 58/106 (55%)
leucine-rich repeat 19..40 CDD:275378 11/20 (55%)
LRR 2 40..61 9/20 (45%)
leucine-rich repeat 41..63 CDD:275378 10/21 (48%)
LRR 3 63..84 14/20 (70%)
leucine-rich repeat 64..86 CDD:275378 15/21 (71%)
LRR 4 86..107 10/20 (50%)
leucine-rich repeat 87..109 CDD:275378 12/21 (57%)
LRR 5 109..128 11/18 (61%)
leucine-rich repeat 110..121 CDD:275378 7/10 (70%)
PRK00409 <157..236 CDD:234750 14/84 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..240 16/75 (21%)

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