DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and AVT7

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_012178.1 Gene:AVT7 / 854721 SGDID:S000001350 Length:490 Species:Saccharomyces cerevisiae


Alignment Length:361 Identity:79/361 - (21%)
Similarity:146/361 - (40%) Gaps:87/361 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 HLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTA-------FICTHCSYVLVKCGHKLYYR-TRR 122
            :|:|..:|.|.|.:|::|...|:::|:..|:..|       |:.:.||..|:...:..::. ...
Yeast    13 NLVKTIVGAGTLAIPYSFKSDGVLVGVILTLLAAVTSGLGLFVLSKCSKTLINPRNSSFFTLCML 77

  Fly   123 TKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNFEQLI----SYW 183
            |..|.|.|.:.|                      :.:..||....|.|::...|..|.    :||
Yeast    78 TYPTLAPIFDLA----------------------MIVQCFGVGLSYLVLIGDLFPGLFGGERNYW 120

  Fly   184 TGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQDLPPVE----E 244
            .       :...::::||.|:..:..|||.:.:.:.|..::.:   :.|.:.|.:|...|    .
Yeast   121 I-------IASAVIIIPLCLVKKLDQLKYSSILGLFALAYISI---LVFSHFVFELGKGELTNIL 175

  Fly   245 RESVVWSTLPQF------FSITIFAMEAIGVVMPLENNMKTPQSFLGICGVLSQGMSGVTLIYML 303
            |..:.|..:..|      |||.|||......:.|:.|.:| ..|...|..|::..:|..|.::::
Yeast   176 RNDICWWKIHDFKGLLSTFSIIIFAFTGSMNLFPMINELK-DNSMENITFVINNSISLSTALFLI 239

  Fly   304 LGFLGYLRYGSATGESITLNL-PIEEWPAQTVKVLISLAVYC-------TFGLQF---------- 350
            :|..|||.:|:.|..::.||. |...|        |.:..:|       :|.|.|          
Yeast   240 VGLSGYLTFGNETLGNLMLNYDPNSIW--------IVIGKFCLGSMLILSFPLLFHPLRIAVNNV 296

  Fly   351 FVCLEIIWDGIKEKCKKRPTLVNYV----LRTVLVT 382
            .:.:||.:.|...  ::.|.:..|.    ||.:.:|
Yeast   297 IIWIEITYGGANP--EEDPQVSEYTRASNLRPISMT 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 79/361 (22%)
SdaC 67..445 CDD:223884 79/360 (22%)
AVT7NP_012178.1 Aa_trans 4..477 CDD:279788 79/361 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
TreeFam 00.000 Not matched by this tool.
43.820

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