DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and AVT3

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_012776.1 Gene:AVT3 / 853710 SGDID:S000001629 Length:692 Species:Saccharomyces cerevisiae


Alignment Length:423 Identity:103/423 - (24%)
Similarity:190/423 - (44%) Gaps:46/423 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 NPHPTTDNETLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYY 118
            :||.::..:.:..|||:.:|||:|.:|.||...|  .|     |:|.....|:.:...|...|. 
Yeast   293 HPHKSSTVKAVLLLLKSFVGTGVLFLPKAFHNGG--WG-----FSALCLLSCALISYGCFVSLI- 349

  Fly   119 RTRRTKM---TFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASN---FE 177
             |.:.|:   .:.::....:  |||        .||:||..:.|:..|..:.|||..|:|   |.
Yeast   350 -TTKDKVGVDGYGDMGRILY--GPK--------MKFAILSSIALSQIGFSAAYTVFTATNLQVFS 403

  Fly   178 QLISYWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQDLPPV 242
            :...:....::||...|...::..:.::...|:..|:..:::|::|:.|||...:.|.:..:...
Yeast   404 ENFFHLKPGSISLATYIFAQVLIFVPLSLTRNIAKLSGTALIADLFILLGLVYVYVYSIYYIAVN 468

  Fly   243 EERESVV-------WSTLPQFFSITIFAMEAIGVVMPLENNMKTPQSFLGICGVLSQGMSGVTLI 300
            ......:       ||.   |....||..|.||:::|::.:||.|:.|.   ..||..|..|.:|
Yeast   469 GVASDTMLMFNKADWSL---FIGTAIFTFEGIGLLIPIQESMKHPKHFR---PSLSAVMCIVAVI 527

  Fly   301 YMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEII--W----D 359
            ::..|.|.|..:||.....:.||.|.:.....||::|.:||:..:..||.|..:.|:  |    :
Yeast   528 FISCGLLCYAAFGSDVKTVVLLNFPQDTSYTLTVQLLYALAILLSTPLQLFPAIRILENWTFPSN 592

  Fly   360 GIKEKCKKRPTLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVIELIVHWE 424
            ...:...|...|.||....::|..:::..|....:..|:.|:|:|....|..|:|.::.......
Yeast   593 ASGKYNPKVKWLKNYFRCAIVVLTSILAWVGANDLDKFVSLVGSFACIPLIYIYPPLLHYKASIL 657

  Fly   425 SGFGKYNWILWKNAIITLCGIGALVFGTQAAIK 457
            ||..:...:|  :.|:.:.|:..:.:.:...||
Yeast   658 SGTSRARLLL--DLIVIVFGVAVMAYTSWQTIK 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 100/418 (24%)
SdaC 67..445 CDD:223884 98/396 (25%)
AVT3NP_012776.1 Aa_trans 295..687 CDD:279788 100/418 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I928
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I1099
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm9188
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
TreeFam 00.000 Not matched by this tool.
87.860

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