DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and AVT1

DIOPT Version :10

Sequence 1:NP_648327.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_012534.1 Gene:AVT1 / 853457 SGDID:S000003761 Length:602 Species:Saccharomyces cerevisiae


Alignment Length:485 Identity:104/485 - (21%)
Similarity:187/485 - (38%) Gaps:111/485 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 IQPRKSDTEQALAG-------NDFDPFALR-----DNPHPT------TDNETLTHLLKASLGTGI 76
            ::|..|.||....|       ||.|...::     |....|      |..:|:.:.:...:|.|:
Yeast   162 LRPTASLTEMMSGGAGRRFTNNDMDSIVVKRVEGVDGKVVTLLAGQSTAPQTIFNSINVLIGIGL 226

  Fly    77 LGMPFAFMCSGLIMGIFSTIFTAF-ICTHC-SYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGP 139
            |.:|.....:|.::|:  |:...| :.|.| :.:|.:|     ..|..|.:::|::..|||    
Yeast   227 LALPLGLKYAGWVIGL--TMLAIFALATFCTAELLSRC-----LDTDPTLISYADLGYAAF---- 280

  Fly   140 KWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNFEQLISYWTGTAVSLRMLICIMLVPLILI 204
                |....|..|.||.|.|...|...|  ::...:...|...::.|  ..:::...::.|.:.|
Yeast   281 ----GTKGRALISALFTLDLLGSGVSLV--ILFGDSLNALFPQYSTT--FFKIVSFFIVTPPVFI 337

  Fly   205 AWVPNLKYLAPVSMVANVFM-------GLGLGITFYYLVQDLPP---VEERESVVWSTLPQFFSI 259
                      |:|:::|:.:       |..|.|....|.:...|   |...|:.:|....:...:
Yeast   338 ----------PLSVLSNISLLGILSTTGTVLVICCCGLYKSSSPGSLVNPMETSMWPIDLKHLCL 392

  Fly   260 TIFAMEAI---GVVMP-LENNMKTPQSFLGICGVLSQGMSGVTLIYMLLGFLGYLRYGSATGESI 320
            :|..:.|.   ..|.| |:.:|:.|..|.. |...:..::.||.|...:  :|:|.:|:...:.|
Yeast   393 SIGLLSACWGGHAVFPNLKTDMRHPDKFKD-CLKTTYKITSVTDIGTAV--IGFLMFGNLVKDEI 454

  Fly   321 TLNLPIEEWPAQTVKVLIS-------LAVYCTFGLQFFVCLEIIWD---------GIKEKCKKRP 369
            |.|:.:.|...:.|..|||       :|............|:::.:         .||.:..|..
Yeast   455 TKNVLLTEGYPKFVYGLISALMTIIPIAKTPLNARPIVSVLDVLMNVQHIDEAASAIKRRAAKGL 519

  Fly   370 TLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGA-FCFSILGLIFPVVIEL------IVHWESGF 427
            .:.|.:...|:.   |::|:..|.....:..:|| .||:|. ||.|....|      |..||.  
Yeast   520 QVFNRIFINVVF---VLIAINFPEFDKIIAFLGAGLCFTIC-LILPCWFYLRLCKTTIKPWER-- 578

  Fly   428 GKYNWILWKNAIITLC--------GIGALV 449
                    ....:|:|        |:||.:
Yeast   579 --------VACHVTICISVVLSTLGVGAAI 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_648327.1 SLC5-6-like_sbd 56..456 CDD:444915 95/447 (21%)
AVT1NP_012534.1 Aa_trans 206..601 CDD:279788 94/441 (21%)

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