DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and AT4G38250

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_195538.1 Gene:AT4G38250 / 829982 AraportID:AT4G38250 Length:436 Species:Arabidopsis thaliana


Alignment Length:442 Identity:124/442 - (28%)
Similarity:204/442 - (46%) Gaps:70/442 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LRDNPHPTTDNETLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHK 115
            |...|..::..:|..::..|.:|.|:||:|:||..:|.:||:...:..:.:..||..:||     
plant    27 LGKGPPLSSQFKTFANVFIAVVGAGVLGLPYAFKRTGWLMGVLLLVSVSVLTHHCMMLLV----- 86

  Fly   116 LYYRTRRTKMTFAEIAEAAFQK-GPKWCRGFAPVAKFS-ILFGLF--LTYFGTCSVYTVIVAS-- 174
               .|||...:|    .|...| |.....|||...... |:..||  |:..|.|..|.:.:.:  
plant    87 ---YTRRKLDSF----NAGISKIGSFGDLGFAVCGSLGRIVVDLFIILSQAGFCVGYLIFIGTTL 144

  Fly   175 --------------NFEQLISYWTGTAVSLRMLICIMLVPLIL-IAWVPNLKYLAPVSMVANVFM 224
                          .|.:|.|.:.|  ||.:.|......|..| :..:..|.:|||:|:.|::  
plant   145 ANLSDPESPTSLRHQFTRLGSEFLG--VSSKSLYIWGCFPFQLGLNSIKTLTHLAPLSIFADI-- 205

  Fly   225 GLGLGITFYYLVQD-LPPVEERESVV----WSTLPQFFSITIFAMEAIGVVMPLENNMKTPQSFL 284
             :.||.....:|:| :..:::|..||    .|.......:.:::.|.:|:|:|||:.||....| 
plant   206 -VDLGAMAVVIVEDSMIILKQRPDVVAFGGMSLFLYGMGVAVYSFEGVGMVLPLESEMKDKDKF- 268

  Fly   285 GICG-VLSQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLA----VYC 344
               | ||:.||..::|||:..|.||||.:|..|.:.||.||     .|..|..::.|.    ::.
plant   269 ---GKVLALGMGFISLIYIAFGILGYLAFGEDTMDIITANL-----GAGLVSTVVQLGLCINLFF 325

  Fly   345 TFGLQFFVCLEIIWDGIKEKCKKRPTLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSIL 409
            ||.|......||:     |:...| .:.:..||.|||.|..::|:.||....|:.|:|:....:|
plant   326 TFPLMMNPVFEIV-----ERRFSR-GMYSAWLRWVLVLAVTLVALFVPNFADFLSLVGSSTCCVL 384

  Fly   410 GLIFPVVIELIVHWESGFGKYNWILWKN--AIITLCGIGALVFGTQAAIKDI 459
            |.:.|.:..|:|..|    :..|:.|.:  ||:.| |:...|.||.:::.:|
plant   385 GFVLPALFHLLVFKE----EMGWLQWSSDTAIVVL-GVVLAVSGTWSSLSEI 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 121/432 (28%)
SdaC 67..445 CDD:223884 116/410 (28%)
AT4G38250NP_195538.1 SLC5-6-like_sbd 34..429 CDD:382020 121/431 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1306
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1622
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D464614at2759
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm1178
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.880

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