DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and AT3G30390

DIOPT Version :10

Sequence 1:NP_648327.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_566854.1 Gene:AT3G30390 / 822740 AraportID:AT3G30390 Length:460 Species:Arabidopsis thaliana


Alignment Length:398 Identity:84/398 - (21%)
Similarity:149/398 - (37%) Gaps:77/398 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 HLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLV----KCGHKLYYRTRRTKMT 126
            :|....:|.||:.:|......||.:||...:..||: |..|...:    |.|....|        
plant    51 NLATTIIGAGIMALPATMKILGLGLGITMIVVMAFL-TDASIEFLLRFSKAGKNRSY-------- 106

  Fly   127 FAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIV----ASNFEQLI------- 180
                       |......|....:..:...:.:...|...||.:|:    |...|..|       
plant   107 -----------GGLMGGSFGNPGRILLQVAVLVNNIGVLIVYMIIIGDVLAGKTEDGIHHFGVLE 160

  Fly   181 -----SYWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSM-VANVFMGLGLGITFYYLVQD- 238
                 .:|.|.|..|.:....:..||.....:.:||:.:.:|: :|.||:.:..||:...|:.. 
plant   161 GWFGHHWWNGRAAILLITTLGVFAPLACFKRIDSLKFTSALSVALAVVFLIITAGISIMKLISGG 225

  Fly   239 ------LPPVEERESV--VWSTLPQFFSITIFAMEAIGVVMPLENNMKTPQSFLGICGVLSQGMS 295
                  ||.|.:..|.  :::.:|    :.:.|......|..::|.::.|..   |..|:...:.
plant   226 VAMPRLLPDVTDLTSFWNLFTVVP----VLVTAFICHYNVHSIQNELEDPSQ---IRPVVRSALM 283

  Fly   296 GVTLIYMLLGFLGYLRYGSATGESITLN------LPIEEWPAQTVKVLISLAVYCTFGLQFFVCL 354
            ..:.:|::....|:|.:|..|.:.:..|      :|........|:|..:|.:...|.:.|:. |
plant   284 LCSSVYIMTSIFGFLLFGDDTLDDVLANFDTDLGIPFGSILNDAVRVSYALHLMLVFPIVFYP-L 347

  Fly   355 EIIWDGIKEKCKKRPTLVNYVLRTVLVTAAVVLAV-----AVPTIG---PFMGLIGAFCFSILGL 411
            .|..||:.....:..:..|  :|...:||.::..:     .:|:|.   .|.|...|.|   ||.
plant   348 RINIDGLLFPSARSLSTSN--VRFGCLTAGLISVIFLGANFIPSIWDAFQFTGATAAVC---LGF 407

  Fly   412 IFPVVIEL 419
            |||..|.|
plant   408 IFPASIIL 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_648327.1 SLC5-6-like_sbd 56..456 CDD:444915 84/398 (21%)
AT3G30390NP_566854.1 SLC5-6-like_sbd 42..447 CDD:444915 84/398 (21%)

Return to query results.
Submit another query.