DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and AT2G42005

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_850361.1 Gene:AT2G42005 / 818801 AraportID:AT2G42005 Length:413 Species:Arabidopsis thaliana


Alignment Length:430 Identity:113/430 - (26%)
Similarity:189/430 - (43%) Gaps:78/430 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ETLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRRTKMT 126
            :|..::..|.:|.|:||:|:||..:|.:||:.:....|.:..||..:||....||......   :
plant    27 KTFANVFIAIVGAGVLGLPYAFKRTGWLMGLLTLFSVAALINHCMMLLVHIRRKLGVSNIG---S 88

  Fly   127 FAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNFEQLISYWTGTA-VSL 190
            |.::..||       |   ..:.:|.:...:.|:..|.|..|.:.:.:....|......|. :||
plant    89 FGDLGFAA-------C---GNLGRFVVDILIILSQAGFCVGYLIFIGNTLANLSKPTKSTTLMSL 143

  Fly   191 RMLICIMLVPLILIAW-----------VPNLKYLAPVSMVANVFMGLGLGITFYYLVQD--LPPV 242
            |.|:.:.  |..|..|           :..|.:|||:|:.|:|   :.||.....:|:|  :..|
plant   144 RHLMGVS--PKSLYIWGCFPFQLGLNSIKTLTHLAPLSIFADV---VDLGAMAVVIVEDIKITVV 203

  Fly   243 EERESVVWSTLPQFF---SITIFAMEAIGVVMPLENNMKTPQSFLGICG-VLSQGMSGVTLIYML 303
            :..:.|.:..:..||   .:.::|.|.:|:|:|||:..|....|    | ||:..|..:.::|..
plant   204 QRPQVVAFGGMSVFFYGMGVAVYAFEGVGMVLPLESETKDKDKF----GKVLALSMLFIAVMYGS 264

  Fly   304 LGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLA----VYCTFGLQFFVCLEII----WDG 360
            .|.|||:.:|..|.:.||.||     .|..|..|:.|.    ::.||.|......||:    |.|
plant   265 FGVLGYMAFGDDTMDIITANL-----GAGVVSSLVQLGLCINLFFTFPLMMNPVFEIVERRFWSG 324

  Fly   361 IKEKCKKRPTLVNYV--LRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVIELIVHW 423
            :            |.  ||.:||.|..::|:.||....|:.|:|:.....||.:.|.:..|:|..
plant   325 M------------YCVWLRWLLVLAVTLVALLVPNFADFLSLVGSSVCCALGFVLPSLFHLMVFK 377

  Fly   424 ESGFGKYNWILWKNAI----ITLCGIGALVFGTQAAIKDI 459
            :.       :.||...    |.|.|:...|.||.:::.:|
plant   378 DE-------MEWKQRALDVGILLLGVILGVSGTWSSLTEI 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 112/425 (26%)
SdaC 67..445 CDD:223884 107/409 (26%)
AT2G42005NP_850361.1 SLC5-6-like_sbd 23..408 CDD:382020 112/426 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 157 1.000 Domainoid score I1306
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1622
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D464614at2759
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm1178
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.880

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