DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and AT2G39130

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001324655.1 Gene:AT2G39130 / 818499 AraportID:AT2G39130 Length:550 Species:Arabidopsis thaliana


Alignment Length:529 Identity:101/529 - (19%)
Similarity:204/529 - (38%) Gaps:132/529 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NIVDSG--SKHAPQEM-------------EQFLP-----GEGKVMYKIQPR----KSDTEQALAG 43
            :.:.||  .:|.|:.:             ||.||     .:| ::..|..|    :.|.:.::..
plant    88 SFLSSGLIRRHTPESLPTVTKPLLEEQADEQALPKHRLSSQG-LLSPIPSRRGSMRKDEKSSMVS 151

  Fly    44 NDFDPFALRDNPHPTTDN----ETLTHLLKASLGTGILGMPFAFMCSG-------LIMGIFSTIF 97
            ::.          |.:.|    :.:.:.|....|.|||..|:|....|       .:.|:.| .:
plant   152 HEI----------PMSRNSSYGQAVLNGLNVLCGVGILSTPYAAKEGGWLGLMILFVYGLLS-FY 205

  Fly    98 TAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYF 162
            |..:..:|            ..:.....|:.:|.:||          |....:..:...|:|..:
plant   206 TGILLRYC------------LDSESDLETYPDIGQAA----------FGTTGRIFVSIVLYLELY 248

  Fly   163 GTCSVYTVIVASNFEQLISYWTGTAVSL-----------RMLICIMLVPLILIAWVPNLKYLAPV 216
            ..|..|.::.:.|   |.|.:...|:|:           .:|..:.::|.:.:..:..|.|::..
plant   249 ACCVEYIILESDN---LSSLYPNAALSIGGFQLDARHLFALLTTLAVLPTVWLRDLSVLSYISAG 310

  Fly   217 SMVANVFMGLGLGITFYY-LVQDLPPVEERESVVWSTLPQFFSITIFAMEAIGVVMPLENNMKTP 280
            .::|:|.:.|.|   |:. ||.::....:..::..||||....:..:......|...:..:|..|
plant   311 GVIASVLVVLCL---FWIGLVDEVGIHSKGTTLNLSTLPVAIGLYGYCYSGHAVFPNIYTSMAKP 372

  Fly   281 QSF-------LGICGVLSQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLI 338
            ..:       .|||          ||:|..:..:||..:|.:|....|||||.:       .:..
plant   373 SQYPAVLLTCFGIC----------TLMYAGVAVMGYTMFGESTQSQFTLNLPQD-------LIAT 420

  Fly   339 SLAVYCTF---GLQFFVCLEIIWDGIKEKCKKRPTLVNYV---LRTVLVTAAVVLAVAVPTIGPF 397
            .:||:.|.   ..::.:.:..:...::|....|....::.   :||:||.:.:::.:|:|..|..
plant   421 KIAVWTTVVNPFTKYALTISPVAMSLEELIPSRHIRSHWYAIGIRTLLVFSTLLVGLAIPFFGLV 485

  Fly   398 MGLIGAFCFSILGLIFP------VVIELIVHWESGFGKYNWILWKNAIITLCGIGALVFGTQAAI 456
            |.|||:....::.||.|      :|...:...:         :....:|.:.|..:.|.|:.:|:
plant   486 MSLIGSLLTMLVTLILPPACFLSIVRRKVTPTQ---------MMLCVLIIIVGAISSVIGSYSAL 541

  Fly   457 KDIVKAYSN 465
            ..||:..:|
plant   542 SKIVEKLTN 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 85/441 (19%)
SdaC 67..445 CDD:223884 80/415 (19%)
AT2G39130NP_001324655.1 SLC5-6-like_sbd 158..538 CDD:382020 84/434 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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